Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14]
1,356 sequences; 198,035,861 total letters
Query= NC_019406.1
Length=279967
Score E
Sequences producing significant alignments: (Bits) Value
seq1353 84.2 4e-11
seq1352 84.2 4e-11
seq1349 84.2 4e-11
seq1334 84.2 4e-11
seq762 84.2 4e-11
seq25 84.2 4e-11
seq7 84.2 4e-11
>seq1353
Length=15711
Score = 84.2 bits (92), Expect = 4e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022
|||||||||||||| |||||||||||| ||||||||||| |||||| |||||||||
Sbjct 1856 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 1797
Query 133023 CCCTCCCCCGCATCCA 133038
|| ||||||| |||
Sbjct 1796 CCTATCCCCGCAACCA 1781
>seq1352
Length=32338
Score = 84.2 bits (92), Expect = 4e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022
|||||||||||||| |||||||||||| ||||||||||| |||||| |||||||||
Sbjct 21776 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 21717
Query 133023 CCCTCCCCCGCATCCA 133038
|| ||||||| |||
Sbjct 21716 CCTATCCCCGCAACCA 21701
>seq1349
Length=20638
Score = 84.2 bits (92), Expect = 4e-11
Identities = 66/79 (84%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022
|||||||||||||| |||||||||||| ||||||||||| |||||| |||||||||
Sbjct 9779 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 9838
Query 133023 CCCTCCCCCGCATCCACAA 133041
|| ||||||| ||| ||
Sbjct 9839 CCTATCCCCGCAACCAAAA 9857
>seq1334
Length=31116
Score = 84.2 bits (92), Expect = 4e-11
Identities = 66/79 (84%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022
|||||||||||||| |||||||||||| ||||||||||| |||||| |||||||||
Sbjct 12511 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 12570
Query 133023 CCCTCCCCCGCATCCACAA 133041
|| ||||||| ||| ||
Sbjct 12571 CCTATCCCCGCAACCAAAA 12589
>seq762
Length=13283
Score = 84.2 bits (92), Expect = 4e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022
|||||||||||||| |||||||||||| ||||||||||| |||||| |||||||||
Sbjct 6288 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 6229
Query 133023 CCCTCCCCCGCATCCA 133038
|| ||||||| |||
Sbjct 6228 CCTATCCCCGCAACCA 6213
>seq25
Length=66545
Score = 84.2 bits (92), Expect = 4e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022
|||||||||||||| |||||||||||| ||||||||||| |||||| |||||||||
Sbjct 53527 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 53468
Query 133023 CCCTCCCCCGCATCCA 133038
|| ||||||| |||
Sbjct 53467 CCTATCCCCGCAACCA 53452
>seq7
Length=30121
Score = 84.2 bits (92), Expect = 4e-11
Identities = 66/79 (84%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022
|||||||||||||| |||||||||||| ||||||||||| |||||| |||||||||
Sbjct 12742 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 12683
Query 133023 CCCTCCCCCGCATCCACAA 133041
|| ||||||| ||| ||
Sbjct 12682 CCTATCCCCGCAACCAAAA 12664
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 895751216759520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |