Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14]
1,356 sequences; 198,035,861 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq185 257 3e-63
seq991 149 1e-30
>seq185
Length=662383
Score = 257 bits (284), Expect = 3e-63
Identities = 558/825 (68%), Gaps = 15/825 (2%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
|||||| || ||||| | |||||||| ||||| ||||| || |||| |||||| ||||
Sbjct 113993 CTGGTACTCGCCCACCTTCTTCTCAAAAAAGTTGGTCTTGCCGTCCAGCGAGATCATCTC 114052
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958
||||||| ||| ||||| ||||| || | | | ||||| || | |||||
Sbjct 114053 CATGAAGTTGAACGGGTTCTTGGTGTTGTAGATTTTTCCAACGCCCAACTCGACGAGCAG 114112
Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018
| |||| || || |||| ||||| | ||||| ||| | ||||||||| || ||
Sbjct 114113 GCGATCAGCCACAAACTCAATGTACTGCGACATTAGGTCGCAGTTCATGCCGATCAGATT 114172
Query 48019 CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTG 48078
|||||||| || | || | ||||||| || || | ||| || || | | ||||
Sbjct 114173 CACGGGCAGGGCATCGGTCAAGAACTCCTGTTCAATGTCCACAGCGTCACGAATGATCTC 114232
Query 48079 CTTAACGCGGGACTCT-GAGG-GTTTGTTGCGC-AGGTGCTTGGCATAGAGCATGCAG-G 48134
| | ||| ||| || | | | | ||| | || |||| | | | || ||| |
Sbjct 114233 GATGATGCG---CTCGCGACGCGGTCGCTGCACCAGATGCTGGA---ACATCA-GCACCG 114285
Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194
||||||| | ||||| || ||||| ||| ||||||| ||||||||||| || ||||
Sbjct 114286 CAAAGTCGCAGTGCAGACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTCAGGCCAG 114345
Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254
|||| | || | || || ||||||||||| | || || ||| |||||||||||
Sbjct 114346 GCATCAGGCCGCGCTTCTTCAGCCAGAAAATAGAGGCAAAGCTGCCGCTGAAGAAGATGC 114405
Query 48255 CCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCC 48314
|||| || || || || || ||| || |||||| || || |||| |||||||
Sbjct 114406 CCTCGACGGCGGCAAATGCAATGATCCGCTCTCCAAAGTTGGCAGACTTGGAGGAGATCC 114465
Query 48315 AGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA 48374
|||| || |||||||| || || ||| | ||||| ||||| ||||| || |
Sbjct 114466 AGGACAGGGCCCAGTCAGCTTTGCGCTTCACCGCCGGCATGGTCTCGATGGCATTAAACA 114525
Query 48375 GCTTCTTGCACTCACCTGCG--TCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTC 48432
| | | | || | |||| ||| | || || || |||| |||||||||
Sbjct 114526 GGTAGTCCCGCTGA--TGCGGATCCCGGATGTAAGTGTCGATCAGCACACTGTACATCTC 114583
Query 48433 AGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTG 48492
|| || || ||||| || ||||||||||| || |||||| | |||||| | |||
Sbjct 114584 CGAATGGACGTTCTCCATGGCGATCTGGAAGCCATAGAAGCAGCGGGCCTCTGTGATCTG 114643
Query 48493 CACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAA 48552
||| || ||| | ||| | ||| ||||| ||||| || ||||| || || |||||
Sbjct 114644 CACCTCCTGACTGAAACGCTCGACCAGGTTCTCGTTGACGATGCCATCGGAGGCGGCAAA 114703
Query 48553 GAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTG 48612
||| || || ||||| | |||||| || |||| | | || || |||| |
Sbjct 114704 GAACGCCAGCACATGGGAGATGAAATGACGTTCGTCATCCTTAAGGCGATGCCAGTCGGT 114763
Query 48613 TACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC 48657
|| || ||| ||| ||||| |||||||| ||||| ||||| ||
Sbjct 114764 TAAATCCTTGGACAGATCCACCTCTTCCACGGTCCAAAAGGAGGC 114808
>seq991
Length=691118
Score = 149 bits (164), Expect = 1e-30
Identities = 800/1252 (64%), Gaps = 66/1252 (5%)
Strand=Plus/Plus
Query 212900 CAGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCC-TCCTCTGGTAAAAGTTTG 212958
|||||| |||| || | |||||| || || ||||| || | || | | || | ||||
Sbjct 358052 CAGGTGGTGGTTAACCACCTGGAATTCGCCGGAGAGAACGCGTCGTGTA-TAGATATTTG 358110
Query 212959 AAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCA 213018
||||| ||||||| | ||||| || |||| ||||| |||||| || || ||||
Sbjct 358111 TGGTGTACGGCTCGAAGGATTCGTTATTGCCCATTATCTGGGCAGTGGATGCCGTTGGCA 358170
Query 213019 TGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGA-AGCTCT 213077
|||| || ||||| ||| |||||| || || || | ||| | | || ||||
Sbjct 358171 TGGGGGCGACCAGCAGAGAGTTCCTGACACCATGTTTCTTGATC-GACTCCTTCAGCTTG 358229
Query 213078 GCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAG 213137
||||||||||| | | || ||| |||| ||||| || |||| |
Sbjct 358230 GCCCAGTCCCAGAGGTTCGTTGGGACCTTGTCC---------CACATATCGTACTGAAGA 358280
Query 213138 ATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGC 213197
|| || ||||| ||||| ||||||| ||| | || || || | ||| ||||||
Sbjct 358281 ATTCCCTTGCTTACGGGACTGCCCTCGTATGTTTCATACGGACCTTCGGCCTGGGCCAGT 358340
Query 213198 TCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAG---- 213253
|| || || | ||| || | || ||||| |||||||| |||| | ||| ||
Sbjct 358341 TCACAACTTGCTTCCAGTGCGCCATAATAGATAGTTTCAAAGATCTGCTGGTTTAGGAGA 358400
Query 213254 -CTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCC 213312
|| | | |||| | ||| ||||| ||| |||| | || ||||||| | |
Sbjct 358401 CCTGCCT--CCTC-GCTTTCGT-AAGGGAATC-TCATCAGAATCAAGGCATCAGCAAAAC 358455
Query 213313 CCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGG 213372
|||| | || ||||| ||||| | || |||| || || || | ||| || ||
Sbjct 358456 CCTGAATGCCAATGCCAATGGGGCGATGCCTCAAATTTGATTTCCGGGCCTCTGGCAGGG 358515
Query 213373 GGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACT---TTGGTGACAT 213429
| ||| | ||| ||| || ||||| || || || | |||||| || ||||| |
Sbjct 358516 GATAATAATTGATGTCAATAATCTTATTCAGATTCT---TAGCCACTGTCTTAGTGACCT 358572
Query 213430 GGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTG---CACAAACTCAGGCAGGG 213486
||| | || | || |||| | || | ||| ||| || |
Sbjct 358573 CCTTCAGTTTCT------TAAAGTCGTACGTCTTCTCAGGGGTCACGAACATGTTGAGAG 358626
Query 213487 CGATGCTGGCCAGGTTGCAAACGGCCACCTCCT-GAGAGTCTGTGTACTCCATGATCTCG 213545
||||| ||||||||||||||||| | || | | | | | | ||||| | ||| ||
Sbjct 358627 CGATGGATGCCAGGTTGCAAACGGCGATTTCGTCGGGCGAC-GAATACTCAACGATTTCT 358685
Query 213546 GTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCA 213605
||||| || || ||||| ||||||||| | ||||| || || ||| ||||
Sbjct 358686 GTGCAAAGATTACTGCACTTGATGGTGCCAACATTCTGCTGATTGCTCTTCCTGTTGCAT 358745
Query 213606 GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTC 213665
| ||||||| | ||||| || || || ||||| | ||| | | | | || | |
Sbjct 358746 GCATCCTTGAACAGCATATAAGGATTGCCAGTCTCCACCTGCGCCTCAATGATGGCGAAC 358805
Query 213666 CAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCG 213725
|| ||| || ||||| ||| ||| || | ||| || |||||||| | |
Sbjct 358806 CACAGGGACTGAGCCTTAACCGTCCGATTGGCTTTTCCTT-CG--GCCTCGTATTTGAGG 358862
Query 213726 TAGAGCTCGTTGAATTCGTGGCCCCAGAC--CCTGTCCAGTCCCGGACAGGA-TGCGGGA 213782
|| | | || ||||||| |||||| || |||| ||| || ||||| ||||||
Sbjct 358863 TACAATTGGTCAAATTCGTCGCCCCAAACATCCTG--CAGGCCGGGACACTTGTGCGGG- 358919
Query 213783 CACATGAGGCTCCAGTCCCCGTCATCT--CTGA-CTCTCTGCATGAACAGGTCCGGGACC 213839
||||| || ||||| | |||| | || | | | || ||| || || || || | |
Sbjct 358920 CACATCAGCGACCAGTTC---TCATTTGCCTCAACGCGCTTCATAAAGAGATCAGGTATC 358976
Query 213840 CACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGA 213899
|| || || || | || | | | |||| ||| || | ||| || |||
Sbjct 358977 CAGAGGGCATAAAATAAATCGCGAGCACGATTCTCTTCCTTACCGGTGTTCTTCTTCAGT 359036
Query 213900 TCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGC 213959
|| | || ||||| | || | ||||| ||||||| |||||||||||||||||| ||
Sbjct 359037 TCCAAGAATTCAAAAACATCGGAATGCCAGGGCTCCAAGTAGATGGCAAAGGCGCCAGGG 359096
Query 213960 CTCTTGCCG---CCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGT 214016
| ||||||| ||||| ||||| | || || ||||||||| ||||| | |||
Sbjct 359097 CGCTTGCCGCCACCCTGATCCACGTAACGCGCTACATTGTTGAAGACTCGCAGCATGGGA 359156
Query 214017 ACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTG 214076
|| || || ||||| || || || || ||| | | ||| ||| | || ||
Sbjct 359157 ACGAGGCCATTGGAGGTCCCATTCGTGCCACATATCGAGGTGCCCTTGGCAC---GGATG 359213
Query 214077 CTCATGGA----GAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAG 214124
| ||||| || || ||||| || || ||||||| |||||||| |||
Sbjct 359214 C-AATGGACATTCAGGCCAATGCCGCCCGCCGACTTGGAAATCATGGCACAG 359264
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931517010519040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |