Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq98 93.3 4e-14 >seq98 Length=20832 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 28552 AAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTT 28611 ||||||| || ||||| ||||| || || || || ||||| ||| || ||| |||| Sbjct 12987 AAATGCAGATCTTTGTGAAAACCTTGACTGGAAAGACCATCACCCTGGAGGTGGAGCCTT 12928 Query 28612 CAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATC 28671 | || || | | || | ||| |||||| ||||| |||||| | ||| ||| | Sbjct 12927 CCGACACCATTGAAAATGTGAAGGCCAAAATCCAGGACAAGGAGGGAATCCCCCCAGACC 12868 Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 28731 | ||| | || || || || ||||| || |||| ||| || || | ||||||| Sbjct 12867 AGCAGCGTCTCATTTTCGCCGGCAAGCAGCTGGAGGATGGACGCACCCTGTCGGATTATA 12808 Query 28732 ACATTCAAAAAGAATCTACTCTGCACATGGT 28762 |||| || || |||||||| |||||| |||| Sbjct 12807 ACATCCAGAAGGAATCTACCCTGCACTTGGT 12777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425397769653924