Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq991 95.1 6e-15 >seq991 Length=691118 Score = 95.1 bits (104), Expect = 6e-15 Identities = 153/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 25914 CATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTC 25973 ||||| |||||| || |||||| | ||| || ||||| | |||||||||||||| | Sbjct 358939 CATTTGCCTCAACGCGCTTCATAAAGAGATCAGGTATCCAGAGGGCATAAAATAAATCGC 358998 Query 25974 TCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTG 26033 || | | ||||| || ||| ||||| || || || ||||| ||||||| ||| | Sbjct 358999 GAGCACGATTCTCTTCCTTACCGGTGTTCTTCTTCAGTTCCAAGAATTCAAAAACATCGG 359058 Query 26034 AGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTA 26093 | ||||| || || || ||||| ||||| || | || || ||||| ||||| | Sbjct 359059 AATGCCAGGGCTCCAAGTAGATGGCAAAGGCGCCAGGGCGCTTGCCGCCACCCTGATCCA 359118 Query 26094 CGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAAC 26133 |||| | || | ||||| ||| || ||| ||||| Sbjct 359119 CGTAACGCGCTACATTGTTGAAGACTCGCAGCATGGGAAC 359158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253035818197700