Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq484 134 4e-26 >seq484 Length=707884 Score = 134 bits (148), Expect = 4e-26 Identities = 176/244 (72%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| |||||| | ||| |||||||| ||||||||| | ||| || || || ||| Sbjct 113835 TCCATAGCCTTGATGAGACGTCGCTGAATGTAACCAGTTTCGGCTGTCTTGACGGCGGTA 113894 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCC 302694 ||||| ||||| ||||||||||||| || ||||| | | ||| ||| | || Sbjct 113895 TCAATGAGACCCTCACGACCACCCATGGCGTGGAAATAGAACTCGGAGGGTGTCAAACCG 113954 Query 302695 CCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAG 302754 | | | |||| |||| || || ||||||| |||||| || || |||| | || Sbjct 113955 GCCAGATAGGAATTCTCCACAAAGCCACGCGACTCGGGACCATAATCATCCTTGATGAAA 114014 Query 302755 TGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGT 302814 || |||||||| | || | |||||||| |||||||| || |||||||||||||| Sbjct 114015 TGCGGCAGGGTGCGCTTACGGAATCCGTATGGTATACGCTTGCCCTCAACGTTCTGCTGG 114074 Query 302815 CCCA 302818 |||| Sbjct 114075 CCCA 114078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471792029008972