Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14]
1,356 sequences; 198,035,861 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq991 102 8e-17
seq264 91.5 1e-13
>seq991
Length=691118
Score = 102 bits (112), Expect = 8e-17
Identities = 122/165 (74%), Gaps = 2/165 (1%)
Strand=Plus/Minus
Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316
||||| || || || |||||| |||||||||| |||||||| ||||| || |||||||||
Sbjct 450655 TCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTG 450596
Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376
|| ||| || ||| | | ||| | ||||| | ||||| || |||| ||| |
Sbjct 450595 TCCTGAATCTTGGCTTTGACATTTTCGATAGTGTCCGACGGTTCGACCTCAAGAGTGATG 450536
Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCTTATGTT 137421
|||||||| || | || || ||||| || ||||| ||| ||||
Sbjct 450535 GTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT--CTTGTGTT 450493
>seq264
Length=2409178
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243
||| || || | ||||| ||| ||||| | || || || || || ||||||||||||
Sbjct 1047313 GCCGCCGCGCAGACGCAGAACCAAATGCAGAGTGGACTCCTTCTGGATGTTGTAATCGGA 1047254
Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303
|| || | ||| || || || || || || |||||||||| ||||| || || ||
Sbjct 1047253 CAGGGTACGTCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGGGG 1047194
Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363
||||| || ||||| || || || | | || | ||||| | ||| || ||
Sbjct 1047193 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCCGAGGGCTCGAC 1047134
Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
|||| || | |||||||||||||| || || || || || |||||
Sbjct 1047133 CTCAAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACAAAGATCTGCAT 1047086
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243
||| || || | ||| | || || || | || || || || || ||||||||||||
Sbjct 1045261 GCCACCGCGGAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGA 1045202
Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303
|| || | ||| || || || || || || |||||||||| ||||| || || ||
Sbjct 1045201 CAGGGTACGTCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGGGG 1045142
Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363
||||| || ||||| || || || | | || | || || | ||| || ||
Sbjct 1045141 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTATCAGAGGGCTCGAC 1045082
Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
|||| || | |||||||||||||| || |||||||| ||||||||
Sbjct 1045081 CTCAAGGGTGATGGTCTTGCCGGTCAAAGTCTTTACGAAGATTTGCAT 1045034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488535719179200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |