Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14]
1,356 sequences; 198,035,861 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq991 95.1 3e-14
>seq991
Length=691118
Score = 95.1 bits (104), Expect = 3e-14
Identities = 182/268 (68%), Gaps = 3/268 (1%)
Strand=Plus/Minus
Query 110665 CGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAAT 110724
|||| || | || | ||| || ||||| ||| | ||||||||||| | || |
Sbjct 359181 CGAATGGGACCTCCAATGGCCTCGTTCCCATGCTGCGAGTCTTCAACAATGTAGCGCGTT 359122
Query 110725 ATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGC 110781
| ||| |||| ||||| ||| | |||| | ||||| ||||| | || || ||||
Sbjct 359121 ACGTGGATCAGGGTGGCGGCAAGCGCCCTGGCGCCTTTGCCATCTACTTGGAGCCCTGGC 359062
Query 110782 ATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAG 110841
|||| ||| | ||||||||||| ||||| || || || ||||| | | |
Sbjct 359061 ATTCCGATGTTTTTGAATTCTTGGAACTGAAGAAGAACACCGGTAAGGAAGAGAATCGTG 359002
Query 110842 CACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAA 110901
| || |||||||||||||| | ||||| | ||| | || ||||| || ||| | | ||
Sbjct 359001 CTCGCGATTTATTTTATGCCCTCTGGATACCTGATCTCTTTATGAAGCGCGTTGAGGCAA 358942
Query 110902 ATGGCATGTGGTCTCTTATGTGTCCTCA 110929
||| | ||||| || ||||| || ||
Sbjct 358941 ATGAGAACTGGTCGCTGATGTGCCCGCA 358914
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186792180611116
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |