Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq991 95.1 3e-14 >seq991 Length=691118 Score = 95.1 bits (104), Expect = 3e-14 Identities = 182/268 (68%), Gaps = 3/268 (1%) Strand=Plus/Minus Query 110665 CGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAAT 110724 |||| || | || | ||| || ||||| ||| | ||||||||||| | || | Sbjct 359181 CGAATGGGACCTCCAATGGCCTCGTTCCCATGCTGCGAGTCTTCAACAATGTAGCGCGTT 359122 Query 110725 ATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGC 110781 | ||| |||| ||||| ||| | |||| | ||||| ||||| | || || |||| Sbjct 359121 ACGTGGATCAGGGTGGCGGCAAGCGCCCTGGCGCCTTTGCCATCTACTTGGAGCCCTGGC 359062 Query 110782 ATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAG 110841 |||| ||| | ||||||||||| ||||| || || || ||||| | | | Sbjct 359061 ATTCCGATGTTTTTGAATTCTTGGAACTGAAGAAGAACACCGGTAAGGAAGAGAATCGTG 359002 Query 110842 CACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAA 110901 | || |||||||||||||| | ||||| | ||| | || ||||| || ||| | | || Sbjct 359001 CTCGCGATTTATTTTATGCCCTCTGGATACCTGATCTCTTTATGAAGCGCGTTGAGGCAA 358942 Query 110902 ATGGCATGTGGTCTCTTATGTGTCCTCA 110929 ||| | ||||| || ||||| || || Sbjct 358941 ATGAGAACTGGTCGCTGATGTGCCCGCA 358914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186792180611116