Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= NC_025115.1 Length=40002 Score E Sequences producing significant alignments: (Bits) Value seq755 91.5 4e-14 >seq755 Length=17303 Score = 91.5 bits (100), Expect = 4e-14 Identities = 173/251 (69%), Gaps = 9/251 (4%) Strand=Plus/Plus Query 38484 TTCCATCATCCGGCGCCGCCGCTCAAGCATGTCCCCCCGGCGGTAGGCGCCTTCCACCTT 38543 || ||||||| ||||| ||||| || || || || || || ||| |||||||||| Sbjct 7479 TTTCATCATCTCCTGCCGCTTCTCAAACAGATCTCCACGACGATAAGCGGCTTCCACCTT 7538 Query 38544 GCTTTCCACTGCGTGCGCCAGCGCCATCTCGGCGAGCGAGTCTGGGTATTCGGTGCACTC 38603 | | | ||||||||||||||||||||||| | | ||||| || || || Sbjct 7539 GTTGCTGATGGCGTGCGCCAGCGCCATCTCGGCCACTTCGCTGGGGTAGTCCGTCTCTTC 7598 Query 38604 GGCCACCCAGTCGCGGAACGTCGACCGGAAGCCGTGCACGGTGA-TCCCTTCGTAGCCCA 38662 || |||||||||| ||||| ||||| | ||| || ||||||| ||||||| ||| Sbjct 7599 AGCAGCCCAGTCGCGAAACGTGGACCGCAGGCCATGTACGGTGACGTCCTTCGT-GCC-- 7655 Query 38663 TGCGG-----TCGAGCATGTTCAGCATGGCCATGTTCGATAGCGGCTTGCCTTTCTTCTG 38717 || | | ||| || || || | || ||||||||| | || |||||| Sbjct 7656 GGCCGCAATATGAAGCGCCTTGGACAGAGCTACGTCTGATAGCGGCCTACCCCGCTTCTG 7715 Query 38718 GCCGGGGAACA 38728 ||||||||||| Sbjct 7716 GCCGGGGAACA 7726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127882740735008