Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= NC_025963.1 Length=139981 Score E Sequences producing significant alignments: (Bits) Value seq977 147 2e-30 >seq977 Length=388812 Score = 147 bits (162), Expect = 2e-30 Identities = 162/214 (76%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 5333 AGAAGCACTCGCAGATGAGCTGCGCCACGCGGTCGCCTCGCCGCACCACGAAGGTCTCTT 5392 ||| || |||||||||| ||| || | ||||| || ||| |||| |||| | ||| Sbjct 370770 AGATGCGTTCGCAGATGAACTGGGCGATTCGGTCACCGCGCTTCACCTCGAACTCCACTT 370829 Query 5393 GGCCGAA--GTTGAAGAGCACCACTCCCAGGTTCCCTCGGAAGTCCGGGTCCACGACGCC 5450 |||| |||||| |||||||| |||||||| || ||| ||||| |||||| ||||| Sbjct 370830 --CCGAGTGGTTGAACAGCACCACACCCAGGTTGCCGCGGTAGTCCTCGTCCACCACGCC 370887 Query 5451 CGCTCCCACATCCACGAAGTTGTTTACCGCGAGACCGGACCTCGGCGCCACGCGACCGTA 5510 |||||||| || | ||||| || || ||||||||||| | || ||||| |||||||| Sbjct 370888 AGCTCCCACGTCGATAAAGTTCTTCACGGCGAGACCGGAGCGTGGGGCCACCCGACCGTA 370947 Query 5511 GCAGCCGTATGGCGGGTGGATCTGCAGATCGGTC 5544 | |||| | ||| |||| |||||| |||||| Sbjct 370948 GGAGCCCTCGGGCACCTGGACCTGCAGGTCGGTC 370981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447803609600160