Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1170 196 6e-45 >seq1170 Length=5152482 Score = 196 bits (216), Expect = 6e-45 Identities = 299/421 (71%), Gaps = 10/421 (2%) Strand=Plus/Plus Query 146917 TTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCC 146976 || || || ||||| ||||| |||||||| |||| ||| |||| ||| || || ||||| Sbjct 3759081 TTTAGCGGGTCCACATGGTTTAGGTAGACATGCGTGTCACCCATGGTATGAACGAAGTCG 3759140 Query 146977 CCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATG 147036 || || || || || ||||| ||||| | ||||| ||||||||| | |||| || ||| Sbjct 3759141 CCGGGTTTCAGACCAGTCACATGGGCTATCATGTGGGTGAGCAGGGCGTAGGAAGCGATG 3759200 Query 147037 TTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCC 147096 ||||| || || ||||||||||| || | ||||||||||||||| || || || || Sbjct 3759201 TTGAAAGGTACGCCCAGGCCCATATCAGCGCTCCTCTGGTACAGCTGACAGGACAGTTCG 3759260 Query 147097 CC---GTC---GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCG 147150 || ||| || ||| | || || |||| |||||| ||||||| ||||| Sbjct 3759261 CCACGGTCCTGGGAGACGAAGAATTGCGCCAGGCAGTGGCATGGCGGCAATGCCATTTTT 3759320 Query 147151 GGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTA 147210 || | |||| ||| ||||| || || | | | |||||| | || || | || Sbjct 3759321 GGTATGTCCAGGGGATTCCATGCAGACATGATAATGCGCCTGTCCGACGGATTGGTTTTT 3759380 Query 147211 ATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGT--TTGTCCCGC 147268 || ||||| ||| | || |||||| | ||||||||| | ||||| | || | | Sbjct 3759381 ATTGTCTCGATCACCTGACGCAACTGGTCGATGCCCTGGCCGCTGTAGTCGTCGTTGCAC 3759440 Query 147269 AGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGC 147328 |||| |||| |||||||| |||| |||||| |||||||| ||||| |||| |||| Sbjct 3759441 -GTCC-GGTACTCTGCCCCAAAATGCCGCCACTGAAAGCCGTATACTGGACCCAAATCGC 3759498 Query 147329 C 147329 | Sbjct 3759499 C 3759499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583478109878400