Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14]
1,356 sequences; 198,035,861 total letters
Query= NC_026927.1
Length=228143
Score E
Sequences producing significant alignments: (Bits) Value
seq71 123 4e-23
>seq71
Length=15183
Score = 123 bits (136), Expect = 4e-23
Identities = 497/775 (64%), Gaps = 42/775 (5%)
Strand=Plus/Minus
Query 160964 GCTTTAATCTCTGGTATAACTGGGCAGGATGGATCCTATCTTGCTGAACTTCTACTGAAG 161023
||||| || | ||| | |||||||||||||| || |||||||||||| |||| ||| |
Sbjct 4444 GCTTTGATTACGGGTGTTACTGGGCAGGATGGCTCTTATCTTGCTGAATTTCTTCTGGGG 4385
Query 161024 AAGGGGTATGAAGTCCATGGTATTATTCGTAGAACCTCCTCGTTTAATACAGGAAGA--- 161080
|| || || ||||| |||||||| | || | | || | || ||||||| ||
Sbjct 4384 AAAGGTTACGAAGTACATGGTATCAAGCGCCGTGCTTCTTTATTCAATACAGCCCGAGTG 4325
Query 161081 ----------ATC--GATC---ATATCTTCGATCAGT----TACACCTCCACTACGGGGA 161121
||| |||| |||| | || || || | || || || |||||
Sbjct 4324 GACGGCATTTATCAGGATCCGCATAT-TGGGAATAGCCGCCTAAAGCTGCATTATGGGGA 4266
Query 161122 TTTGACTGACTCC-CTGAACATAGTCTCTATCATTAAG---GAAGTAGAACCTGATGAGA 161177
|||||| ||| || || | | || | |||| | || || | || ||||||
Sbjct 4265 TTTGACGGACACCTCTAATC----TCACGCGCATTTTGTCAGACGTGCAGCCAGATGAGG 4210
Query 161178 TCTACAACCTAGGGGCACAGAGTCATGTGAAAGTATCTTTCGAGGAACCTGAATATACAG 161237
| || ||||| || |||||| ||||||| || ||| || || |||||| |
Sbjct 4209 TTTATAACCTCGGCGCACAGTCTCATGTGGCGGTGAGTTTTGAAATGCCAGAATATTCTA 4150
Query 161238 CACAGACTGATGCTCTGGGAACCCTAAGAGTATTGGAGGCAGTTCGTCTCCTAGGTATGA 161297
|| | ||||| ||||| | || | | | || || |||| | ||||| ||
Sbjct 4149 CAGATGTGGATGCAATGGGA-CGCTTCGGTTGCTAGAAGCCATTCGCTTTCTAGGATTGG 4091
Query 161298 CAGATAGGGTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTACAAGAGA 161357
| | ||| | || |||||||| || ||| | || |||||||| || || |
Sbjct 4090 GTAAAACAACGCGTTTTTATCAGGCATCTACATCTGAACTATACGGGTTGGTGCAGGAAA 4031
Query 161358 CACCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCTAAACTCT 161417
|||| || || ||||||||||||||| | || || || || | || |||||| | |
Sbjct 4030 CACCGCAAAAGGAAACAACACCTTTCCATCCGCGCAGCCCCTACGCTGTGGCTAAAATGT 3971
Query 161418 ATGGATATTGGATT---GTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGTAGTG 161474
| | || |||||| ||| || ||| | ||| ||| | ||| | ||| ||| |
Sbjct 3970 ACGCTTACTGGATTACCGTA---AATTACCGTGAGGCTTACGATATGTATGCCTGTAACG 3914
Query 161475 GTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGATTA 161534
| ||| | || |||||||| || || || ||||| || || ||||| || || ||||
Sbjct 3913 GGATTTTGTTTAACCATGAAAGCCCGCGTCGTGGTGAAACATTTGTAACACGCAAAATTA 3854
Query 161535 CTAGGGGACTATCCCGTATTAGTACAGGACTACAGGATTGTCTATACCTAGGTAATCTAA 161594
| | || || || |||| | || || | | || || ||| | || ||| | |
Sbjct 3853 CGCGTGGGCTGGCCAATATTGCTGTTGGTCTGGAAAAATGCCTGTACATGGGGAATATCA 3794
Query 161595 ACTCAAGACGAGATTGGGGTCATGCTGAAGACTA--TGTGGAGGCTATGTGGTTGATGTT 161652
|| || || ||||| ||||| |||| || || | | || | ||| ||||| |
Sbjct 3793 ACAGTCTGCGTGACTGGGGGCATGCAAAAGATTACGTGCGCATGCAA--TGGATGATGCT 3736
Query 161653 ACAACAGGAAACTCCTGATGACTATGTGATTGCCACAGGTAAAGAGTATTCAGTG 161707
||||| || || ||||| | ||| ||||| ||||| | ||||||| |||
Sbjct 3735 CCAACAAGAGCAGCCAGATGATTTTGTAATTGCAACAGGGGTACAGTATTCTGTG 3681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 729917227693280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |