Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14]
1,356 sequences; 198,035,861 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq991 389 5e-103
seq185 150 2e-31
>seq991
Length=691118
Score = 389 bits (430), Expect = 5e-103
Identities = 1226/1871 (66%), Gaps = 48/1871 (3%)
Strand=Plus/Plus
Query 68374 GTAAACTGAATGG-GTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAG 68432
|| ||||| |||| || | | || || || || || ||||||||||| |||||||| ||
Sbjct 357723 GTGAACTGTATGGCGTTCGCA-GCCGGCTTCGTGCGGAGATAGTACATTCCGGTTTTAAG 357781
Query 68433 ACCTAGACT-CCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTA 68491
|| || || ||| ||| ||||| || || || ||| ||| | || ||||| |
Sbjct 357782 GCC-AGCCTTCCACGAGTAAAAATGTATGGACGTCAGCTTGCCATAGTTGGGCTCGGCAA 357840
Query 68492 TATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTA 68551
|||||| || | ||||||||| ||||||||||| || || | ||| || |||||||| |
Sbjct 357841 CATGAATGTTGAACGATTGACTCTGATCGATGAATGCACCACGATCCGCAGCCATTTTAA 357900
Query 68552 TAATACTCTTTTGA-GGA-ATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCAT-CTG 68608
| | ||| || ||| || ||||| | ||||| | | | | | ||| |||
Sbjct 357901 TGGTGGACTT--GACGGAGATCTCCCACACCGTCTTGTACA---GATCGCGCACATGCTG 357955
Query 68609 G---AAGGC-TCG-TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTC 68663
| | ||| ||| |||| ||||| || |||| ||| || || ||||| || ||
Sbjct 357956 GGGGATGGCCTCGATATTCTGAATTGAGCCACGGCTGGAAATTATCTGGTTCTTCATATC 358015
Query 68664 ATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAA 68723
||||| |||||| | |||||| | | | || | || || | ||||| | || ||
Sbjct 358016 ATCATCCCACAAGTCAAGCTCCGTCAGATCCCTCAACAGGTGGTGGTTAACCACCTGGAA 358075
Query 68724 TTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATT 68783
||| || || | || | || || || ||||| |||| || || || | ||||| ||
Sbjct 358076 TTCGCCGGAGAGAACGCGTCGTGTATAGATATTTGTGGTGTACGGCTCGAAGGATTCGTT 358135
Query 68784 ATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCT 68843
||| |||| || || ||||| ||||| |||||||| || || |||| | | || ||
Sbjct 358136 ATTGCCCATTATCTGGGCAGTGGATGCCGTTGGCATGGGGGCGACCAGCAGAGAGTTCCT 358195
Query 68844 AAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTAC 68903
| ||||||| | |||| || || || | ||| ||||| || | | ||| ||
Sbjct 358196 GACACCATGTTTCTTGATCGACTCCTTCAGCTTGGCCCAGTCCCAGAGGTTCGTTGGGAC 358255
Query 68904 AACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGTTTC 68963
| ||| | |||||| || |||||||| || ||| | || | ||||||||
Sbjct 358256 CTTGTCCCACATATCGTACTGAAGAATTCCCTTGCTTACGGGACTGCCCTCGTATGTTTC 358315
Query 68964 ATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGT 69023
||| || ||||| | || |||||||||||||| || | ||| || ||||| || ||
Sbjct 358316 ATACGGACCTTCGGCCTGGGCCAGTTCACAACTTGCTTCCAGTGCGCCATAATAGATAGT 358375
Query 69024 TTCGAAAATCTTCTTATT---GAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAA 69080
||| || |||| || || |||| || || || | || ||| | || ||| | |
Sbjct 358376 TTCAAAGATCTGCTGGTTTAGGAGACCTGC--CTCCTCG-CTTTCGTAAGGG-AATCTCA 358431
Query 69081 A-AGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTAT 69139
||||| || ||||| || || ||||||| ||||| || || || | ||| ||| ||
Sbjct 358432 TCAGAATCAAGGCATCAGCAAAACCCTGAATGCCAATGCCAATGGGGCGATGCCTCAAAT 358491
Query 69140 TTGAACTTTCAG--CTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATT 69197
|||| |||| | | ||||| | ||||||||||| || || ||||| ||||| |||||
Sbjct 358492 TTGA--TTTCCGGGCCTCTGGCAGGGGATAATAATTGATGTCAATAATCTTATTCAGATT 358549
Query 69198 TCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATC--AAATCGTC-CATCTAT 69254
| ||| ||| || ||||| ||||| ||| || | || || || |
Sbjct 358550 CTTAGCCACTGTCTTAGTGACCTCCTTCAGTTTCTTAAAGTCGTACGTCTTCTCAGGGGT 358609
Query 69255 AACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGC 69314
|| ||||| || || || | ||||| || || ||||| || | || | | |
Sbjct 358610 CACGAACATGTTGAGAGCGATGGATGCCAGGTTGCAAACGGCGATTTCGTCGGGCGACGA 358669
Query 69315 ATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATT 69374
||| | | || ||||| || |||||||| || ||||| || || | ||| ||||||||
Sbjct 358670 ATACTCAACGATTTCTGTGCAAAGATTACTGCACTTGATGGTGCCAACATTCTGCTGATT 358729
Query 69375 ACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGA 69434
||||| |||| || || |||||| | || ||| | ||| | ||||| || | ||| |
Sbjct 358730 GCTCTTCCTGTTGCATGCATCCTTGAACAGCATATAAGGATTGCCAGTCTCCACCTGCGC 358789
Query 69435 TTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTC---TTGTAACGCTTCTC 69491
|| || || | ||| | | | ||| | | || ||| ||| |||| ||
Sbjct 358790 CTCAATGATGGCGAACCACAGGGACTGAGCCT---TAACCGTCCGATTG----GCTTTTC 358842
Query 69492 TTT----TTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATC 69547
|| || |||| || | | || ||||| || ||||||||||| | || |
Sbjct 358843 CTTCGGCCTCGTATTTGAGGTACAATTGGTCAAATTCGTCGCCCCAAACATCCTGCAGGC 358902
Query 69548 CAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAA 69607
| ||||| | | || ||||||| ||||| |||| ||| ||| || |||||||
Sbjct 358903 CGGGACACTTGTGCGGGCACATCAGCGACCAGTTCTCATTTGCCTCAACGCGCTTCATAA 358962
Query 69608 ATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTG 69667
| ||||| || ||||| || || ||| | ||| | | | ||| ||||| || || |
Sbjct 358963 AGAGATCAGGTATCCAGAGGGCATAAAATAAATCGCGAGCACGATTCTCTTCCTTACCGG 359022
Query 69668 TAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCG 69727
| || || || || || | || || | || ||| |||||||| || || | || || |
Sbjct 359023 TGTTCTTCTTCAGTTCCAAGAATTCAAAAACATCGGAATGCCAGGGCTCCAAGTAGATGG 359082
Query 69728 CCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGA 69787
| | | | || || || || || |||||||| | ||| | || || || |||
Sbjct 359083 CAAAGGCGCCAGGGCGCTTGCCGCCACCCTGATCCACGTAACGCGCTACATTGTTGAAGA 359142
Query 69788 CTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTC 69847
||| |||||| |||| | ||||| || | ||||| || ||| | || | | ||
Sbjct 359143 CTCGCAGCATGGGAACGAGGCCATTGGAGGTCCCATTCGTGCCACATATCGAGGTGCCCT 359202
Query 69848 TTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCAC 69907
| || || || | | | || || || || || ||| || || || | ||||
Sbjct 359203 TGGCACGGATGCAATGGACATTCAGGCCAATGCCGCCCGCCGACTTGGAAATCATGGCAC 359262
Query 69908 AACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAAC 69967
| ||| || | | | ||||| || || ||| | |||| | ||||| || |
Sbjct 359263 AGTGTTCCACCGACTTGAAAATACCTTCGATCGAATCGGATGTCATAGTCAGAAGGAAGC 359322
Query 69968 AGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGA 70027
|| || | ||| | | |||| | || || | || || || ||||| ||||
Sbjct 359323 AGGACGAGAGTTGCGGTCGGTTAGTGGCAGCGGCGAACAGAGTGGGTGAGGCGTGTGTGA 359382
Query 70028 ACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCACTGATGA 70086
| | || || |||| |||||| || |||| ||| | || ||||| ||| |||
Sbjct 359383 AGAAGCGCTCTGACAGCAAATTGTAGGTCTCAACAGCGGCATCGATATCTTCAC-CATGG 359441
Query 70087 ATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATT 70146
||||| ||||| || ||||| | |||||| || || || || || | || ||| |
Sbjct 359442 ATTCCAATCGCCACGCGCATTAGCATATGTTGCGGCCGCTCGACAATCTTGCCATTACTC 359501
Query 70147 TTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTT 70206
|| | || || || ||| || || ||||| |||||||| ||||| |||||| |
Sbjct 359502 TTAAGCAAATACGAACGTTCGAGGGTCTTAAAGCCAAAATAATTGTACCCAAAGTCACGA 359561
Query 70207 TCGTAAATAAT 70217
|||||||| ||
Sbjct 359562 TCGTAAATTAT 359572
>seq185
Length=662383
Score = 150 bits (166), Expect = 2e-31
Identities = 533/826 (65%), Gaps = 9/826 (1%)
Strand=Plus/Plus
Query 39329 TGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCC 39388
||||| || || || ||||| ||||| || || ||||| |||| || || | |||
Sbjct 113994 TGGTACTCGCCCACCTTCTTCTCAAAAAAGTTGGTCTTGCCGTCCAGCGAGATCATCTCC 114053
Query 39389 ATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATCAAT 39448
||||| | ||||| || | | || || ||||| || || || || | ||
Sbjct 114054 ATGAAGTTGAACGGGTTCTTGGTGTTGTAGATTTTTCCAACGCCCAACTCGACGAGCAGG 114113
Query 39449 CTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTA 39508
| ||| || ||||| || ||||| ||| | || || ||||| || || || ||
Sbjct 114114 CGATCAGCCACAAACTCAATGTACTGCGACATTAGGTCGCAGTTCATGCCGATCAGATTC 114173
Query 39509 ACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATC--G 39566
|| || || || || || | ||||| | ||| ||||| || || || || ||| |
Sbjct 114174 ACGGGCAGGGCATCGGTCAAGAACTCCTGTTCAATGTCCACAGCGTCACGAATGATCTCG 114233
Query 39567 ATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAG-GCGAAG 39625
||| | | ||| || |||| | |||| | ||| | ||||| | ||| || |||
Sbjct 114234 ATGATGCG--CTCGCGACGCGGTCGCTGCACCAGATGCTGGAACATCA-GCACCGCAAAG 114290
Query 39626 TCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATT 39685
|| || || || ||||| || | || | ||||| || || || || ||||||||
Sbjct 114291 TCGCAGTGCAGACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTCAGGCCAGGCATC 114350
Query 39686 AGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCT 39745
|| || ||||| || ||||| || || | ||||| || ||||||||||| ||
Sbjct 114351 AGGCCGCGCTTCTTCAGCCAGAAAATAGAGGCAAAGCTGCCGCTGAAGAAGATGCCCTCG 114410
Query 39746 ACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATT--ATG-TATCCACTTC 39802
|| || |||||||||| | | |||||| | | | | || | | ||||| |
Sbjct 114411 ACGGCGGCAAATGCAATGATCCGCTCTCCAAAGTTGGCAGACTTGGAGGAGATCCAGGAC 114470
Query 39803 TGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAA 39862
| ||||| |||||||| ||| || ||||| || || || |||||||| || ||
Sbjct 114471 AGGGCCCAGTCAGCTTTGCGCTTCACCGCCGGCATGGTCTCGATGGCATTAAACAGGTAG 114530
Query 39863 TGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGG 39922
| | || ||| | || || || || | || ||| ||||| || ||||||
Sbjct 114531 TCCCGCTGATGCGGATCCCGGATGTAAGTGTCGATCAGCACACTGTACATCTCCGAATGG 114590
Query 39923 ATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCT 39982
| ||| || || || ||||| || || || || || | || || || || || |||||
Sbjct 114591 ACGTTCTCCATGGCGATCTGGAAGCCATAGAAGCAGCGGGCCTCTGTGATCTGCACCTCC 114650
Query 39983 GAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCC 40042
|| || | || ||| || || || || || ||||| |||||||| || |||
Sbjct 114651 TGACTGAAACGCTCGACCAGGTTCTCGTTGACGATGCCATCGGAGGCGGCAAAGAACGCC 114710
Query 40043 AATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCT 40102
| ||||| || |||| ||| || | | || |||||| | | |||
Sbjct 114711 AGCACATGGGAGATGAAATGACGTTCGTCATCCTTAAGGCGATGCCAGTCGGTTAAATCC 114770
Query 40103 TTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCT 40148
|| || | ||| || ||||| | |||||||| || ||||| ||||
Sbjct 114771 TTGGACAGATCCACCTCTTCCACGGTCCAAAAGGAGGCCTCGGCCT 114816
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686897156895840
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