Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq185 104 7e-17 >seq185 Length=662383 Score = 104 bits (114), Expect = 7e-17 Identities = 355/535 (66%), Gaps = 30/535 (6%) Strand=Plus/Minus Query 443337 TTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTA 443396 ||||||||| |||| ||| | ||||| |||||||| || |||| ||| | || || Sbjct 114802 TTTTGGACCGTGGAAGAGGTGGATCTGTCCAAGGATTTAACCGACTGGCAT---CGCCT- 114747 Query 443397 TCTAGCCATGA---ACGCGATTTCTTCAAATGCATCT--TGGCCTTCTTTGCACCGAGCG 443451 || |||| ||| ||||| || ||| | |||| |||||||| | || Sbjct 114746 --TAAGGATGACGAACGTCATTTCATCTCC--CATGTGCTGGCGTTCTTTGCCGCCTCCG 114691 Query 443452 ACGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGG 443511 | || |||||| ||||| ||||| ||||||| | ||| | ||| |||| Sbjct 114690 ATGGCATCGTCAACGAGAACCTGGTCGAGCGTTTCAGTCAGGAGGTGCAGATCACAGAGG 114631 Query 443512 CCCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTC 443571 |||||| |||||| | ||||| ||| ||||||||| | || | ||| | |||||| Sbjct 114630 CCCGCTGCTTCTATGGCTTCCAGATCGCCATGGAGAACGTCCATTCGGAGATGTACAGTG 114571 Query 443572 AGTTGATCAAGACACTAAT-TCCGAACGAAGACGAA-CAGCGGTCC-ATCT-TCTCAT-C 443626 | ||||| |||||| | |||| | | || | |||||| | | || | | || | Sbjct 114570 TGCTGATC--GACACTTACATCCG---GGATCCGCATCAGCGGGACTACCTGTTTAATGC 114516 Query 443627 GTTCATGACCACGCCAGGCATCACT-GAAAAGACTCGCTGGGCAAAACAGTGGCTCGAAC 443685 || ||||| ||| | | | | |||| || |||||| ||| || | Sbjct 114515 CATCGAGACCATGCCGGCGGTGAAGCGCAAAG-CTGACTGGGCCCTGTCCTGGATCT--C 114459 Query 443686 GAGAAAATCT--CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTT 443743 || ||| || ||| | ||||| | | || ||||| | ||||| || | || Sbjct 114458 CTCCAAGTCTGCCAACTTTGGAGAGCGGATCATTGCATTTGCCGCCGTCGAGGGCATCTT 114399 Query 443744 GTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTC 443803 || |||||||||||| ||||| || |||||| |||| ||||| || || |||| || | Sbjct 114398 CTTCAGCGGCAGCTTT-GCCTCTATTTTCTGGCTGAAGAAGCGCGGCCTGATGCCTGGCC 114340 Query 443804 TGACCTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGC 443858 ||||||| ||||| || ||| || ||||||||| |||| |||||||| || Sbjct 114339 TGACCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGTCTGCACTGCGACTTTGC 114285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588308404647420