Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14]
1,356 sequences; 198,035,861 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq991 372 4e-98
>seq991
Length=691118
Score = 372 bits (412), Expect = 4e-98
Identities = 1218/1864 (65%), Gaps = 34/1864 (2%)
Strand=Plus/Plus
Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436
|||||||| |||| | || || || || || ||||||||||| || ||||| ||
Sbjct 357723 GTGAACTGTATGGCGTTCGCAGCCGGCTTCGTGCGGAGATAGTACATTCCGGTTTTAAGG 357782
Query 75437 CCCAGACT-CCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTAT 75495
|| || || ||| ||| ||||| ||| || || ||| ||| | || ||||| |
Sbjct 357783 CC-AGCCTTCCACGAGTAAAAATGTATGGACGTCAGCTTGCCATAGTTGGGCTCGGCAAC 357841
Query 75496 ATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTAT 75555
|||||| || | ||| ||||| ||||||||||| || || | ||| || |||||||| ||
Sbjct 357842 ATGAATGTTGAACGATTGACTCTGATCGATGAATGCACCACGATCCGCAGCCATTTTAAT 357901
Query 75556 AATGGTCTTTTGA-GGA-ATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCAT-CTGG 75612
||| ||| || ||| || ||||| | || ||| | | | | | ||| ||||
Sbjct 357902 GGTGGACTT--GACGGAGATCTCCCACACCGTCTTGTACA---GATCGCGCACATGCTGG 357956
Query 75613 AAGAT----TTG-TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCA 75667
||| | | |||| ||||| || || | || || || ||||| || |||
Sbjct 357957 GGGATGGCCTCGATATTCTGAATTGAGCCACGGCTGGAAATTATCTGGTTCTTCATATCA 358016
Query 75668 TCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAAT 75727
|||| |||||| | ||| || | | | || | || || | ||||| | || |||
Sbjct 358017 TCATCCCACAAGTCAAGCTCCGTCAGATCCCTCAACAGGTGGTGGTTAACCACCTGGAAT 358076
Query 75728 TCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTG 75787
|| || || | || | ||| || || ||||| |||| || || || | ||||| ||
Sbjct 358077 TCGCCGGAGAGAACGCGTCGTGTATAGATATTTGTGGTGTACGGCTCGAAGGATTCGTTA 358136
Query 75788 TTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTG 75847
|| |||| || || ||||| || || || ||||| || || |||| | | || |||
Sbjct 358137 TTGCCCATTATCTGGGCAGTGGATGCCGTTGGCATGGGGGCGACCAGCAGAGAGTTCCTG 358196
Query 75848 AGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACA 75907
| ||||||| | |||| || || || | ||| ||||| || | | ||| ||
Sbjct 358197 ACACCATGTTTCTTGATCGACTCCTTCAGCTTGGCCCAGTCCCAGAGGTTCGTTGGGACC 358256
Query 75908 ACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCG 75967
||||| | |||||| || |||||||| ||||| | || | ||||||||
Sbjct 358257 TTGTCCCACATATCGTACTGAAGAATTCCCTTGCTTACGGGACTGCCCTCGTATGTTTCA 358316
Query 75968 TAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTT 76027
|| | || || | || ||||| ||||| || || | || || ||||| || |||
Sbjct 358317 TACGGACCTTCGGCCTGGGCCAGTTCACAACTTGCTTCCAGTGCGCCATAATAGATAGTT 358376
Query 76028 TCGAAAATCTTCTTATTAAGAT--CTTGCGCTTCAAGACTATCAAAAGGATAATGTAAA- 76084
|| || |||| || || || | ||| || | | || || |||| ||| | |
Sbjct 358377 TCAAAGATCTGCTGGTTTAGGAGACCTGC-CTCCTCG-CTTTCGTAAGGG-AATCTCATC 358433
Query 76085 AGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTG 76144
||||| || ||||| || | ||||||| ||||| ||||| || | ||| ||| |||
Sbjct 358434 AGAATCAAGGCATCAGCAAAACCCTGAATGCCAATGCCAATGGGGCGATGCCTCAAATTT 358493
Query 76145 GAAATTTCAG--CTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTC 76202
|| |||| | | ||||| | || |||||||| || || ||||| ||||| |||||
Sbjct 358494 GA--TTTCCGGGCCTCTGGCAGGGGATAATAATTGATGTCAATAATCTTATTCAGATTCT 358551
Query 76203 TGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA--TTTTC-CATCTATCA 76259
| | ||| ||| || ||||| ||||| ||| || | | ||| || |||
Sbjct 358552 TAGCCACTGTCTTAGTGACCTCCTTCAGTTTCTTAAAGTCGTACGTCTTCTCAGGGGTCA 358611
Query 76260 CAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCAT 76319
| ||||| || ||||| || ||||| || || |||||||| | || | | | ||
Sbjct 358612 CGAACATGTTGAGAGCGATGGATGCCAGGTTGCAAACGGCGATTTCGTCGGGCGACGAAT 358671
Query 76320 ATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGC 76379
| | | || || ||||| |||||||| |||||||| || |||| ||| || || ||||
Sbjct 358672 ACTCAACGATTTCTGTGCAAAGATTACTGCACTTGATGGTGCCAACATTCTGCTGATTGC 358731
Query 76380 TCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATT 76439
|||| |||| |||| ||||| | || | | | ||| | ||||| || | ||| | |
Sbjct 358732 TCTTCCTGTTGCATGCATCCTTGAACAGCATATAAGGATTGCCAGTCTCCACCTGCGCCT 358791
Query 76440 CGATAATAGATTTCCAGACG-ACTCTAGCTTTTATTATA-GATTTG-TATCGCTTCTCTC 76496
| || || | ||| | | ||| ||| || | | |||| | | | |||| |
Sbjct 358792 CAATGATGGCGAACCACAGGGACTG-AGCCTTAACCGTCCGATTGGCTTTTCCTTCGGCC 358850
Query 76497 TTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGAC 76556
| || ||| | || || | |||||||| || ||||||||||| | || || ||||
Sbjct 358851 TCGTAT-TTGAGG-TACAATTGGTCAAATTCGTCGCCCCAAACATCCTGCAGGCCGGGAC 358908
Query 76557 ATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGAT 76616
| | | ||| ||||||| ||||| | ||| | ||| ||| || |||||||||||||
Sbjct 358909 ACTTGTGCGGGCACATCAGCGACCAGTTCTCATTTGCCTCAACGCGCTTCATAAAGAGAT 358968
Query 76617 CAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCT 76676
|||||||||| || ||| ||||| ||| || | | | ||||| || || || ||||
Sbjct 358969 CAGGTATCCAGAGGGCATAAAATAAATCGCGAGCACGATTCTCTTCCTTACCGGTGTTCT 359028
Query 76677 TTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAA 76736
| || || || | ||| || | || ||| |||||||| || || | || || || |
Sbjct 359029 TCTTCAGTTCCAAGAATTCAAAAACATCGGAATGCCAGGGCTCCAAGTAGATGGCAAAGG 359088
Query 76737 CACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCA 76796
| || || || || || |||||||| | || | || || || | |||| ||
Sbjct 359089 CGCCAGGGCGCTTGCCGCCACCCTGATCCACGTAACGCGCTACATTGTTGAAGACTCGCA 359148
Query 76797 ACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCAC 76856
||| |||| | ||| || || || ||||| || ||| | || | | || ||||
Sbjct 359149 GCATGGGAACGAGGCCATTGGAGGTCCCATTCGTGCCACATATCGAGGTGCCCTTGGCAC 359208
Query 76857 GAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTT 76916
| || | | | ||||| || || || ||| || || || | |||||| |||
Sbjct 359209 GGATGCAATGGACATTCAGGCCAATGCCGCCCGCCGACTTGGAAATCATGGCACAGTGTT 359268
Query 76917 TCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAG 76976
|| | | | || || || || ||| |||| | ||||| || ||| |
Sbjct 359269 CCACCGACTTGAAAATACCTTCGATCGAATCGGATGTCATAGTCAGAAGGAAGCAGGACG 359328
Query 76977 ACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATT 77036
| | ||| | | ||| | || |||| || || || || || ||||| |
Sbjct 359329 AGAGTTGCGGTCGGTTAGTGGCAGCGGCGAACAGAGTGGGTGAGGCGTGTGTGAAGAAGC 359388
Query 77037 TTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTA 77096
|| || || | |||||| || |||| | | || || ||||| ||| ||||| |
Sbjct 359389 GCTCTGACAGCAAATTGTAGGTCTCAACAGCGGCATCGATATCTTCACCATGGATTCCAA 359448
Query 77097 CAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACA 77156
|| || ||||| | |||||| || || || || ||| |||| ||| | || | ||
Sbjct 359449 TCGCCACGCGCATTAGCATATGTTGCGGCCGCTCGACAATCTTGCCATTACTCTTAAGCA 359508
Query 77157 AGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAA 77216
| || || ||| | || ||||| |||||||| ||||| |||||| | |||||||
Sbjct 359509 AATACGAACGTTCGAGGGTCTTAAAGCCAAAATAATTGTACCCAAAGTCACGATCGTAAA 359568
Query 77217 TAAT 77220
| ||
Sbjct 359569 TTAT 359572
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712922315761920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |