Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14]
1,356 sequences; 198,035,861 total letters
Query= NC_031059.1
Length=38773
Score E
Sequences producing significant alignments: (Bits) Value
seq690 95.1 3e-15
>seq690
Length=54228
Score = 95.1 bits (104), Expect = 3e-15
Identities = 449/695 (65%), Gaps = 35/695 (5%)
Strand=Plus/Minus
Query 5589 GGCGTTGCTGC-ATGCGATGGAGGCGGTGAACGCCGACTGCCACCGCTTCGATGTGTTCG 5647
|||| |||| | |||||||||| ||||||||||| || | ||| | || |||||||
Sbjct 7169 GGCGCTGCTTCCATGCGATGGAAGCGGTGAACGCGGATGGGCACAAATGGGACGTGTTCG 7110
Query 5648 TGCTGTGGCC----GGGGTCGGACCGGCCCGAGCGGCCGCAGATCGTG-GCCTATCAGGA 5702
|| ||||| || ||| | ||| ||| ||| ||| ||| || | ||||||
Sbjct 7109 TGAAATGGCCTGATGGCGTC--ATCGG-----GCGTCCGGTGAT-GTGCGCGTTTCAGGA 7058
Query 5703 CCTCTATTCGGGCAAGATCCTCAGCTGGCGGATCGACCATACGCCGAACGAGGTGGCCGT 5762
|| | ||| || | |||||| |||||| | |||| | | ||| || ||| ||
Sbjct 7057 TCTGTTTTCAGGGATGATCCTGTCATGGCGGGTGGACCGTTCTGAAAACCGGGAGGCGGT 6998
Query 5763 GATGGCAGCCTTTGGCGAGATGGTCGAAACCTATGGCATCCCGAAGCACTGCACCTTCGA 5822
| || || ||||| |||||||| | |||||| || ||| ||||
Sbjct 6997 GCGTCTGGCGTTCGGCGACATGGTCGAGGAGTTTGGCATTCCTTCTGTCTGTTATCTCGA 6938
Query 5823 CAACGGGCGGGAATTCGCGGCCAAGTGGCTGTCAGGCGGGGCCAAGACGCGCTATCGCGG 5882
||||||||| | || || | ||||||||| | || || | | || | |
Sbjct 6937 TAACGGGCGGAACTTTGCATCGAAGTGGCTGACTGGTGGTATTGAAAACCGGTTCAGGTT 6878
Query 5883 CAAGATCCGCGACGATGACCCGATGGGTGTTCTGCCGCTTTTGAACATCAAGATCCATTG 5942
|||| |||| ||||| || ||| | ||| ||||||| | | | || | | || ||
Sbjct 6877 CAAGGTCCGTGACGACGATCCGGTTGGTATTCTGCCACAGCTTGGCGTCGATGTTCACTG 6818
Query 5943 GGCGAAGCCGGCCCATGGGCAGGCCAAGCCCATCGAGCGGGCGTTCCGCGATTTTGC-CA 6001
| | | ||| | || ||| | ||||| |||||||| || || || ||| | || ||
Sbjct 6817 GACAACGCCTTACTCGGGCCAGTCGAAGCCGATCGAGCGCGCATTTCGGGATATGGCGCA 6758
Query 6002 GCGACATTTCGAAGGATATCCG--GTTCCAGGGGGCCTATACCGGCAACCGGCCGGATGC 6059
| || | | || | ||||| ||| ||| |||| || |||||| |||| ||
Sbjct 6757 G-AACGTCGCCAA--ACATCCGCACTTCGCGGGTGCCTGGACGGGCAACACGCCGATGGC 6701
Query 6060 CAAGCCGGAGGACTACGCGACGCGGGCCATCCCGCTGGA-CGATTTCGTGC-GCG-TGGT 6116
|||||||||| ||||||| | ||| | ||| | || || |||| || || | |
Sbjct 6700 CAAGCCGGAGAACTACGCCAGCACGGCGGTGCCGATCGAGCGGTTTCTGGCAACGATCGC 6641
Query 6117 GGGCGAGCGCATCGCCGAACACAATGCGCGT----GTCGGGCGCCAGTCGGAAACCGCGG 6172
| |||| ||| | |||| || |||||| |||||||| | | ||| ||||
Sbjct 6640 CGACGAG---ATCCGCAAACATAACGCGCGTGCAGGTCGGGCGAC-GGCGG--TGTGCGG 6587
Query 6173 CGG--GCCGCAGCTTCGATGAGACCTTCGCCGAGAGCTATGCCGCCTCGACGGTCGTGCG 6230
||| | || ||| | || | ||||||| | |||||| | ||| || || |
Sbjct 6586 CGGAAAACTGAGTTTCCAGCAGGCATTCGCCGCGTCCTATGCGGTCTCTCCGATCACTCA 6527
Query 6231 CGCGACGGAGGAGCAGCGGCGCCTCTGGCTGATGG 6265
|||||| ||||| || || |||||||||||||
Sbjct 6526 GGCGACGCCTGAGCAACGTCGTCTCTGGCTGATGG 6492
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 123950004062920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |