Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20simulans_20[refseq_20GCF_5F000754195.2_202014-09-19]
7,619 sequences; 124,963,774 total letters
Query= NC_001348.1
Length=124884
Score E
Sequences producing significant alignments: (Bits) Value
seq1 109 4e-19
>seq1
Length=23539531
Score = 109 bits (120), Expect = 4e-19
Identities = 273/411 (66%), Gaps = 8/411 (2%)
Strand=Plus/Minus
Query 18789 GGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGAC 18848
|| || || ||||| | ||||||||||||||||| ||||| || ||| | || |
Sbjct 2846494 GGCGATCTGGGCCCGGTGTACGGCTTCCAGTGGAGGCATTTCGGGGCGCAGTACGGCACC 2846435
Query 18849 TGTCAATCAAACTATTTACAGCAAGG-AATCGATCAGCTGCAAACTGTTATAGATACAAT 18907
|| | |||| | |||||| |||||| ||||||| || || || || ||
Sbjct 2846434 TGCGACGATGACTACAG-CGGCAAGGGAATCGACCAGCTGCGCCAGGTGATCGACACCAT 2846376
Query 18908 TAAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCC 18967
| | ||||| | |||||| || || || ||| |||||||||| ||| |||||
Sbjct 2846375 CAGGAATAACCCCTCAGACCGACGCATCATCATGTCGGCTTGGAATCCGCTGGACATCCC 2846316
Query 18968 CTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGT-TGCAA-----ACGG 19021
|||| || || || || ||| || ||||||||||| | | | |||
Sbjct 2846315 AAAGATGGCCCTGCCGCCGTGCCACTGCTTGGCGCAGTTTTACGTCTCCGAGAAGCGCGG 2846256
Query 19022 TGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAA 19081
||| | || ||||| | ||||||||| | || |||||||| || ||||| |||||
Sbjct 2846255 TGAGCTGTCGTGCCAGCTCTACCAGAGAAGCGCCGACATGGGCCTGGGCGTACCCTTCAA 2846196
Query 19082 CATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACCGG 19141
||| || || || || || ||| |||| | || ||||| || || || || | ||
Sbjct 2846195 CATCGCCTCCTACGCCCTGCTCACCCACATGATTGCCCATGTGACGGGTCTGAAGCCGGG 2846136
Query 19142 AGATTTAATTCATACAATGGGGGATGCACATATTTACTTGAATCATATAGA 19192
|| || |||| || ||||| ||| |||| | ||| | || || ||||
Sbjct 2846135 CGACTTTGTTCACACCATGGGCGATACACACGTCTACCTCAACCACGTAGA 2846085
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399466903431855
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |