Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20simulans_20[refseq_20GCF_5F000754195.2_202014-09-19]
7,619 sequences; 124,963,774 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq2 89.7 9e-13
>seq2
Length=21544594
Score = 89.7 bits (98), Expect = 9e-13
Identities = 131/183 (72%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 189449 CTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGA 189508
|| |||||| || | ||| ||||| | ||| | || ||||||||||| | ||||| ||
Sbjct 4549513 CTGTGGAACTCGGCGCAACTGCAGCTCGTGCGCGAGGGAAAAATGCACGGCTTTTTGCGC 4549572
Query 189509 ATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGACGCTTTGAGTTAT 189568
||||| ||||| || ||||| || ||||||||| ||||| ||| | || ||| ||
Sbjct 4549573 ATGTACTGGGCCAAAAAGATTCTGGAATGGACTGCGACACCGGAACAGGCGTTGGAGTAC 4549632
Query 189569 AGTATCTATTTGAACAACAAGTACGAACTAGACGGCACG-GATCCTAACGGATACGTAGG 189627
||| ||||| |||||||| || || || ||| || || ||||| || || ||
Sbjct 4549633 GCGATCCTGCTGAACGACAAGTACAGTCTGGATGG-ACGCGACCCCAACGGCTATGTCGG 4549691
Query 189628 TTG 189630
||
Sbjct 4549692 CTG 4549694
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 923108877044760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |