Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20simulans_20[refseq_20GCF_5F000754195.2_202014-09-19] 7,619 sequences; 124,963,774 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 9e-13 >seq2 Length=21544594 Score = 89.7 bits (98), Expect = 9e-13 Identities = 131/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 189449 CTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGA 189508 || |||||| || | ||| ||||| | ||| | || ||||||||||| | ||||| || Sbjct 4549513 CTGTGGAACTCGGCGCAACTGCAGCTCGTGCGCGAGGGAAAAATGCACGGCTTTTTGCGC 4549572 Query 189509 ATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGACGCTTTGAGTTAT 189568 ||||| ||||| || ||||| || ||||||||| ||||| ||| | || ||| || Sbjct 4549573 ATGTACTGGGCCAAAAAGATTCTGGAATGGACTGCGACACCGGAACAGGCGTTGGAGTAC 4549632 Query 189569 AGTATCTATTTGAACAACAAGTACGAACTAGACGGCACG-GATCCTAACGGATACGTAGG 189627 ||| ||||| |||||||| || || || ||| || || ||||| || || || Sbjct 4549633 GCGATCCTGCTGAACGACAAGTACAGTCTGGATGG-ACGCGACCCCAACGGCTATGTCGG 4549691 Query 189628 TTG 189630 || Sbjct 4549692 CTG 4549694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923108877044760