Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20simulans_20[refseq_20GCF_5F000754195.2_202014-09-19] 7,619 sequences; 124,963,774 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1 648 0.0 seq2 288 9e-73 seq9 109 5e-19 seq3570 100 3e-16 seq4 89.7 5e-13 >seq1 Length=23539531 Score = 648 bits (718), Expect = 0.0 Identities = 1280/1886 (68%), Gaps = 29/1886 (2%) Strand=Plus/Plus Query 22104 TCTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGC 22163 |||||| ||| || ||||| ||||| || || || || |||||||| ||||| ||||| | Sbjct 10003395 TCTTGTTCACGGTGAACTGAATGGCATTCGCAGCTGGCTTGGTGCGCAGATAGTACATTC 10003454 Query 22164 CCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCG 22223 | || || ||||| ||||| | |||||| ||||| || |||| |||||||| | | Sbjct 10003455 CGGTTTTAAGACCTGCTTTCCAGGAGTAAAAGTGTATGGAAGTCAGCTTTCCATAGTTTG 10003514 Query 22224 GCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGG 22283 || | ||| | | |||||||||||||||||||| || ||||| || |||||||||| Sbjct 10003515 GCTCGGCCACATGTATGTTGAACGACTGACTCTGATCTATGAACGCACCACGATCGGCGG 10003574 Query 22284 CCATATTTATCAATGTACGCATC-GACATTTCCCATACGGTCTTGTACAGTTGCCTGATC 22342 |||| || ||| || || | || |||||||| || ||||||||||| | | | | Sbjct 10003575 CCATTTTAATCG-TGGACTTGACTGAGATTTCCCACACCGTCTTGTACAGATCTCGCACC 10003633 Query 22343 TCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTA 22402 | ||||| | || || | || | || || | | ||||||| || || Sbjct 10003634 TTCTGGGGTATGGTCTCAATGTTTTGAATCGATCCCCTGCTCGATATGATCTGGTTCTTC 10003693 Query 22403 ATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACT 22462 || |||| |||||| | | |||| | || | || |||| |||| ||||| Sbjct 10003694 ATGTCGTCGTCCCACAAGTCCAGTTCGGTTAGGTCGCGCAACAAATGATGGTTGACCACC 10003753 Query 22463 TGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGAT 22522 || || |||||||||| || || || ||| ||||| | ||| |||| ||||| ||| Sbjct 10003754 TGGAATTCGCCGGACAGAACTCGCCGGGTGTATATGTTCGTGGTGTACGGCTCGAAGGAT 10003813 Query 22523 TCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAG 22582 |||||||| |||| ||||||||| || || || || ||||| || || | || || ||| Sbjct 10003814 TCATTGTTGCCCATTATCTGAGCTGTAGATGCAGTGGGCATGGGAGCAACGAGCAGTGAG 10003873 Query 22583 TTTCTCAAGCCGTGCTTTGAAATTTTACTC-TTGAGCATCGACCAGTCCCACAGATCGGA 22641 || | | |||||||| ||| |||| || | || |||||||||||| | | Sbjct 10003874 TTCCGGACACCGTGCTTCTTAATGG-ACTCCTTCAATTTCTGCCAGTCCCACAGGTTCGT 10003932 Query 22642 CGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTC 22701 ||| || ||||||||||| ||||| ||||| | || ||| |||||||||| || Sbjct 10003933 TGGC---ACCTTGTCCCACATGTCGTACTGCAAAATTCCTTTGCTCACCGGGCTGCCCTC 10003989 Query 22702 GTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTA 22761 ||| |||||||| ||||| | || ||| ||||||||||| || ||||| ||||| || Sbjct 10003990 GTAGGTTTCGTATGGACCTTCGGTCTGGGCCAGTTCGCAGCTGGCTTCCAAGGCGCCATA 10004049 Query 22762 ATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCAT 22821 || || || || || || | || ||||| |||| | ||||||||||||| | Sbjct 10004050 GTAAATCGTTTCAAATATCTGCTGATTCAAGAGACCGGCTTCTTCGCTTTCGTACGGGAA 10004109 Query 22822 ACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTT 22881 |||||| | | || || || || | ||||||| || || || | || || | | Sbjct 10004110 ACGCATGAGAATCAAGGCATCAGCGAATCCCTGAATACCAATGCCCACGGGACGATGCCT 10004169 Query 22882 CAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAA 22941 || ||| ||| ||||||| |||| ||||| |||| ||| ||| | |||| | Sbjct 10004170 CAAATTGGACTTCCTTGCCTCTGGCAGCGGATAATAATTGATATCAATTATCTTGTTTAG 10004229 Query 22942 GTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAA----CGCCCG 22997 ||| |||| || || || || | | || || || | || | Sbjct 10004230 ATTTTTGGTAACTATCTTTGTGACTTCCTTGAGCTTCTTGAAATCATACGTCTTCTCCGG 10004289 Query 22998 ATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTT 23057 || || ||| |||||| |||||| ||||| | ||||| || || | ||| || Sbjct 10004290 CGTG----ACGAACATGTTGAGGGCGATGGAGGCCAAGTTGCAGACTGCAATCTCATCCG 10004345 Query 23058 TGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGC 23117 || | || || || ||||| || || | ||||| ||||| || ||||| | ||| Sbjct 10004346 GTGAGGAATATTCAACGATTTCCGTGCACAAGTTGCTGCACTTAATGGTGCCTACATTCT 10004405 Query 23118 TCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGA 23177 ||||||||| || | ||||| | |||||| ||||||||||||| | || ||||| | Sbjct 10004406 GCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGAAGAGCATGTACGGATTTCCGGTCTCCA 10004465 Query 23178 CCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACCTGC 23237 | |||| ||| ||||| || ||||| | ||||| | ||| ||| | || | Sbjct 10004466 CTTGCGCCTCAATGATGGCAAACCACAGGGATTGAGCCTTAACCGTTCGGTTGGCCCGAC 10004525 Query 23238 CTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGC 23297 | |||| |||||| || | ||||| | || ||||| | || | ||| || | Sbjct 10004526 CCTCTTGCTCGTATTTCTCGTACAGCTTTTCGAATTCATCGCCCCACACTTCGTGGAGAC 10004585 Query 23298 CGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAA 23357 | || | | || |||||||| ||| || || |||||| |||| | Sbjct 10004586 CTGGACACTTGTGGGGGCACATGAGCGACCAATCACCGTTGGCCTCCACGCGTTTCATGA 10004645 Query 23358 AAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGG 23417 | ||||| |||||||| || ||||| ||||| ||||| ||||| ||| |||||||| | Sbjct 10004646 AGAGATCGGGTATCCACAGGGCGTAAAACAGATCGCGTGCGCGATTCTCTTCTTTGCCCG 10004705 Query 23418 TGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGG 23477 ||||||| |||| |||| || || || || |||| ||||| || || || |||| || Sbjct 10004706 TGTTCTTCTTCAGTTCCAGGAACTCAAAGACATCCGAGTGCCAGGGTTCCAGATAAATGG 10004765 Query 23478 CAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACA 23537 |||| || || || | ||| ||| |||||||| || ||||| ||| || || | | Sbjct 10004766 CAAAGGCACCGGGGCGCTTGCCGCCTCCCTGATCCACATAACGAGCCACATTATTAAAGA 10004825 Query 23538 CTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAA---C 23594 | || ||||| || || | || ||||| | || | ||| || | |||| | Sbjct 10004826 CCCTCAGCATGGGAACCAACCCATTGGAAGTACCATTTGTGCCG--CAAA-TCGAGGTGC 10004882 Query 23595 CTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCG 23654 | ||||| |||| | || |||| || || ||||| ||| | || || || ||||| | Sbjct 10004883 CCTTTGCACGAATGCAATGCACGTTGAGTCCGATGCCACCGGCGGACTTGGAGATCATGG 10004942 Query 23655 CGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGA 23714 ||||||||| || || | | | |||||||||||| ||| | | | | | | || Sbjct 10004943 CGCATTGTTCCACAGACTTGAAAATGCCCTCGATGGAGTCGGCCGTCATGGTCAGAAGGA 10005002 Query 23715 AACACGAAGACATTTGCGC----TTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCG 23770 ||||||| |||| |||| |||| | | |||||| |||||||| || || Sbjct 10005003 AACACGACGACAACTGCGGCCGGTTTGTG-GCAGCGGCA---AACAGTGTGGGCGATGCA 10005058 Query 23771 TGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCT 23830 || || ||||| | | ||||| ||||| || || || | ||| ||||| || |||||| Sbjct 10005059 TGTGTGAAGTAGCGCTCCGACAGAAGATTATAGGTTTCCACGGCTGCATCGATATCCTCT 10005118 Query 23831 CCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCG 23890 || || || ||||| || |||||||||| ||| | || |||| ||| | | ||| Sbjct 10005119 CCATGGATTCCGATCGCCACGCGCATCAGCATATGCTGCGGTCGCTCTGCGATCTTTCCG 10005178 Query 23891 TTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAG 23950 || | |||| |||||| ||||| | || || || || |||||||||| ||| |||| Sbjct 10005179 TTTCTCTTGAGCAGATAGGAACGCTCCAGGGTCTTGAAGCCAAAATAGTTATACCCAAAG 10005238 Query 23951 TCACGATCGTGCACTATGGCCGAATT 23976 |||||||| | | ||||| ||| || Sbjct 10005239 TCACGATCATAGATTATGGACGAGTT 10005264 Score = 118 bits (130), Expect = 9e-22 Identities = 180/256 (70%), Gaps = 4/256 (2%) Strand=Plus/Plus Query 31176 GGCGAATTGAATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCG 31235 || || | |||| || ||||| || ||||| ||||| || || ||||| || ||||| Sbjct 10088699 GGTGACTGGAATACAAGATGCAGATCTTCGTTAAGACCCTCACGGGCAAGACCATCACTC 10088758 Query 31236 TCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAG 31295 | || || |||||||| || | | |||||| |||||| | || |||||| |||| Sbjct 10088759 TTGAGGTCGAACCGTCGGATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAG 10088818 Query 31296 GCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGA 31355 | | || || || ||||||||||| || ||||||||||| ||| ||||||| | Sbjct 10088819 GAATTCCTCCAGATCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCA 10088878 Query 31356 CTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGG 31415 | | || ||||||||||| || || || ||||| || |||| || | ||| | | Sbjct 10088879 CCCTCTCTGACTATAACATTCAGAAGGAGTCCACTCTGCACTTGGTGCTCCGCCTGCGTG 10088938 Query 31416 GCGGT----AGAAGCG 31427 | ||| ||||||| Sbjct 10088939 GTGGTGCCAAGAAGCG 10088954 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || || || || ||||| || |||||| | || || || || || Sbjct 4074916 ATGCAGATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCTTGGAGGTGGAGCCTTCT 4074975 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||| ||||| ||| | || || || ||| Sbjct 4074976 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGATAAGGAGGGCATTCCCCCAGATCAG 4075035 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||| ||||| ||| |||| || ||| || ||| || ||| Sbjct 4075036 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCCGACTACAAC 4075095 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || ||||| || || |||| || | ||| | || |||| Sbjct 4075096 ATCCAGAAGGAGTCGACCCTGCACTTGGTGCTCCGCCTGCGTGGTGGTA 4075144 >seq2 Length=21544594 Score = 288 bits (318), Expect = 9e-73 Identities = 569/829 (69%), Gaps = 36/829 (4%) Strand=Plus/Minus Query 57589 AGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATT 57648 |||| || || || || ||||||||||| || || || |||| ||||| || | || | Sbjct 8575854 AGGCTGAGGCTTCTTTCTGGACCGTCGAGGAGGTGGATTTGTCCAAGGACCTTACTGACT 8575795 Query 57649 GGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCG 57708 || | ||| || || ||| | |||| || |||||| |||| || || |||| Sbjct 8575794 GGCACCGCCTGAAGGACGACGAGCGCCATTTCATCTCGCACGTGCTGGCCTTCTTTGCCG 8575735 Query 57709 CATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGA 57768 | || ||||| || || |||||||| |||| || |||| || || ||||| | | Sbjct 8575734 CCTCTGATGGCATCGTAAACGAGAACCTGGTGGAGCGATTCAGTCAGGAGGTGCAGATCA 8575675 Query 57769 CGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGT 57828 ||||||| ||||||| ||||| || || | ||||| || |||||||| || || |||| Sbjct 8575674 CGGAGGCACGATGCTTCTACGGCTTCCAGATCGCCATGGAGAACGTGCACTCGGAGATGT 8575615 Query 57829 ATTCGCTACTCATCGATACGTACGTGAAGGA----CAACGACGAGAAACGTAGACTGTTC 57884 | | | ||||| || ||| | ||| || | ||||| ||| |||||| Sbjct 8575614 ACAGTGTTTTGATCGACACTTACATCCGGGATCCACACCAGCGAGA---GTAC-CTGTTC 8575559 Query 57885 AACGCGATCGAAACAATGCCCGCGATCGCCAAG---AAGGCAGAGTGGTCAATCAAATGG 57941 ||||| |||||||| ||||| || | ||| |||||||| ||| | | ||| Sbjct 8575558 AACGCTATCGAAACGATGCCGGCTGTG---AAGCGCAAGGCAGACTGGGCCCTGTCCTGG 8575502 Query 57942 ATAAAAAGCG-CCA---CGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGA 57997 || || ||| |||| | |||| ||| | | ||||| || |||||||| || Sbjct 8575501 ATCT----CGTCCAAGTCGGCTAATTTCGGGGAGCGCATCATCGCCTTTGCCGCCGTGGA 8575446 Query 57998 AGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGAT 58057 || || ||||| |||||||| || | || || ||| | ||||| ||||| ||||| Sbjct 8575445 GGGCATCTTCTTCAGCGGCAGCTTCGCCTCCATTTTCTGGCTTAAGAAGCGCGGTCTGAT 8575386 Query 58058 GCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTT 58117 ||| || |||| || ||||||| |||| || ||||||||||| | || || || Sbjct 8575385 GCCTGGATTGACCTTCTCCAACGAGCTGATCTCTCGCGACGAGGGCTTGCACTGCGACTT 8575326 Query 58118 TG-CGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGACA 58176 || |||| || |||| | ||| | || | ||| | ||| || |||||| | || | Sbjct 8575325 TGCCGTG-CTGATGTTCCAGCACCTGGTGCAGCGACCCAAGCGCGAGCGCATCATCGAGA 8575267 Query 58177 TTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCA 58236 | ||| ||| ||||| || || || | ||||| ||||||| ||||| || || Sbjct 8575266 TCATCCGCGACGCGGTGGCCATTGAGCAGGAGTTCCTCACCGATGCCCTGCCCGTCAATT 8575207 Query 58237 TGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTT 58296 || |||| |||||| || ||||||| ||||||||||||| || || ||| | || Sbjct 8575206 TGATCGGCATGAACTGCGACCTGATGTCCCAGTACATTGAGTTCGTAGCGGAC---CGTT 8575150 Query 58297 TGCTC---GAACTG---ATTGGAGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTA 58350 ||||| || || ||||| || || |||||||| ||||| || ||| | || | Sbjct 8575149 TGCTCGTGGAGTTGGGCGTTGGAAAG-ATC--TACAACACCAAAAACCCATTTAACTTCA 8575093 Query 58351 TGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGT 58399 || | |||| ||||| || || ||||| |||||||||||||| || || Sbjct 8575092 TGGAGATGATATCGCTGGATGGAAAGACCAACTTTTTCGAAAAGAAGGT 8575044 >seq9 Length=20829647 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || |||||||||||||| ||||||||||| ||||| || |||||| | || || || || Sbjct 5792698 AATATGCAAATTTTCGTTAAGACTCTGACCGGCAAGACCATCACCTTGGAGGTCGAGCCA 5792639 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||| | | || | ||||| | || ||||||||| || | || || || Sbjct 5792638 TCCGATACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGAT 5792579 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||||||| | || ||||| || || ||| |||| ||| ||| || ||| || Sbjct 5792578 CAGCAGCGTTTGATTTTCGCCGGAAAGCAGCTGGAGGACGGACGCACTCTGTCCGACTAC 5792519 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || ||||| ||||| |||| || Sbjct 5792518 AACATCCAGAAGGAGTCGACCCTTCACTTGGTCCT 5792484 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||||||||| ||||| || ||||| | || ||||| || || Sbjct 5792468 CATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACTTTGGAGGTTGAGCCATC 5792409 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| | |||| | ||||| | || ||||||||| || | || || || || Sbjct 5792408 CGATACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGATCA 5792349 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||| | || ||||| || || ||| |||| ||| ||| || ||| || || Sbjct 5792348 GCAGCGTTTGATCTTCGCCGGAAAGCAGCTGGAGGACGGACGCACTCTGTCCGACTACAA 5792289 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || ||||| ||||| |||| || Sbjct 5792288 CATCCAGAAGGAGTCGACCCTTCACTTGGTCCT 5792256 >seq3570 Length=216 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||||||||| ||||| || |||||| | || || || || || Sbjct 6 CATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACCTTGGAGGTCGAGCCATC 65 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| | | || | ||||| | || ||||||||| || | || || || || Sbjct 66 CGATACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGATCA 125 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||| | || ||||| || || ||| |||| ||| ||| || ||| || || Sbjct 126 GCAGCGTTTGATCTTCGCCGGAAAGCAGCTGGAGGACGGACGCACTCTGTCCGACTACAA 185 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||| || || || ||||| ||||| |||| Sbjct 186 CATCCAGAAGGAGTCGACCCTTCACTTGGT 215 >seq4 Length=24153973 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||||| || ||||| || ||||| | || ||||| || || Sbjct 3789827 ATGCAGATCTTCGTGAAGACTCTCACTGGCAAGACCATCACTTTGGAGGTTGAGCCATCG 3789768 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || ||| ||||| || | || || || ||| Sbjct 3789767 GACACCATTGAGAATGTGAAGGCCAAGATTCAGGATAAGGAGGGAATCCCCCCAGATCAG 3789708 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||| ||||| || |||||||| || || |||||| ||| Sbjct 3789707 CAGCGTCTGATCTTCGCCGGCAAGCAACTGGAAGACGGACGCACCCTGTCCGATTACAAC 3789648 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || || || ||||| |||| || Sbjct 3789647 ATCCAGAAGGAGTCAACCCTTCACTTGGTGCT 3789616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445723946322480