Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20simulans_20[refseq_20GCF_5F000754195.2_202014-09-19]
7,619 sequences; 124,963,774 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq1 226 2e-54
>seq1
Length=23539531
Score = 226 bits (250), Expect = 2e-54
Identities = 394/565 (70%), Gaps = 16/565 (3%)
Strand=Plus/Plus
Query 20781 ACGGCCATCTCCATCTCTATGTGGGGATGGGGGTCGTAGCCCTCGAGACTCAGA-TCCGC 20839
|||||||||||||| | || | ||||| || | |||| | | | |||| | ||| |
Sbjct 2845935 ACGGCCATCTCCATTTTGATCTTTGGATGTGGATTGTAGTCGACTAT-CTCAAAGTCCTC 2845993
Query 20840 GC-GCGTAAAGTCCTCCAGACGCGCCACCTTTCTCAAAATCTTCAGCCGCGGAAACGGAC 20898
| ||| || |||||| | | ||||| | ||| ||||| ||||| || |
Sbjct 2845994 GAAGCGGAA-GTCCTCGATGTCCTGCACCTGACGTTTAATGATCAGCTTGGGAAAGGGTC 2846052
Query 20899 GCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAACGTGGTTGTTGTAAACGTGGGCGT 20958
|||| || | | ||| || | ||| || || ||||||||| ||| ||||| | |
Sbjct 2846053 GCGGTGTGCGCTCCAGTTGCTCCTTCAGCGGCTCTACGTGGTTGAGGTAGACGTGTGTAT 2846112
Query 20959 CACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTGAGCGATCAGATACG 21018
| |||| |||||| |||||||| ||||| |||| ||||| || || || |||| | |
Sbjct 2846113 CGCCCATGGTGTGAACAAAGTCGCCCGGCTTCAGACCCGTCACATGGGCAATCATGTGGG 2846172
Query 21019 TCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGCGGACCTCT 21078
| || ||||||||| ||||||||| || || || || ||||||||||||||| ||||
Sbjct 2846173 TGAGCAGGGCGTAGGAGGCGATGTTGAAGGGTACGCCCAGGCCCATGTCGGCGCTTCTCT 2846232
Query 21079 GGTACAGCTGGCAGGACAGCTCCCCCCG------AGCCACGTAAAACTGACACAAAACGT 21132
|||| |||||||| |||||||| || || | ||||||||||| ||| ||
Sbjct 2846233 GGTAGAGCTGGCACGACAGCTCACCGCGCTTCTCGGAGACGTAAAACTGCGCCAAGCAGT 2846292
Query 21133 GACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCGCACATAACGATGC 21192
| || || || || |||||| | || |||| || ||||| || |||| | |||||
Sbjct 2846293 GGCACGGCGGCAGGGCCATCTTTGGGATGTCCAGCGGATTCCAAGCCGACATGATGATGC 2846352
Query 21193 GCCGATC-GTGGGG--CCGCCTGTTAATTAGATCCACCACGTAACGCAGCTGGTCCACCC 21249
| || || | |||| |||| || || | ||| | ||||||||||| | |
Sbjct 2846353 GTCGGTCTGAGGGGTTATTCCTG---ATGGTGTCGATCACCTGGCGCAGCTGGTCGATTC 2846409
Query 21250 CCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAATGTCTCCACTGGA 21309
||| || ||||| ||||| | ||||| |||||| ||||| ||||||||||
Sbjct 2846410 CCTTGCCGCTGTAGTCATCGTCGCAGGTGCCGTACTGCGCCCCGAAATGCCTCCACTGGA 2846469
Query 21310 ACCCGTACACCGGCCCCAGATCGCC 21334
| ||||||||||| |||||||||||
Sbjct 2846470 AGCCGTACACCGGGCCCAGATCGCC 2846494
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427736278191120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |