Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20simulans_20[refseq_20GCF_5F000754195.2_202014-09-19] 7,619 sequences; 124,963,774 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq4 95.1 1e-14 >seq4 Length=24153973 Score = 95.1 bits (104), Expect = 1e-14 Identities = 222/330 (67%), Gaps = 5/330 (2%) Strand=Plus/Plus Query 20950 ATAATGCCGCAGCCCAGCCGGCCGCCCGAGTTGCCCGTAACCTTGCTAAGCGGGTGGTCT 21009 |||| ||||||||| | ||| | || | ||||||||| |||||| ||| ||| | Sbjct 10847786 ATAACGCCGCAGCCGATGCGGGCACCAGCGTTGCCCGTTGACTTGCTCAGCTCGTGTCCA 10847845 Query 21010 GTTAAGCCGAGGTCATCGCGATCCGTGTGCACTACCAAGCTACGACCCAATATGCTGAGC 21069 ||| || |||||| ||| | |||||| || | | | || || | |||||| Sbjct 10847846 CCCTGGCCAAGATCATCGGCATCGGCGTGCACGACAACGGTGCGTCCGATGATGCTGTCG 10847905 Query 21070 GGACCAAACAAGCTCATCACGTTGTCGCTCATGTCGACAGGCGTCAGCGCGGTGCAGCCC 21129 | || || | | ||| | |||| | |||| ||| || | || || ||| Sbjct 10847906 GCGCCGAAGAGCGTGATCTTGGAGTCGGTGATGTTGACCTTGGTGGG-GCAGTC--GCCG 10847962 Query 21130 GCGGAGCGGACGTTGCCCAGATCGCCGACGTGCCGCTCTGCGGCGTCGGGAGCGCCGTGA 21189 | || | ||||||||||||||| | ||| || | || || ||||||||||||| Sbjct 10847963 GTGGCCTCAATGTTGCCCAGATCGCCCAGGTGACGGTTCTCGTCGACGGGAGCGCCGTGC 10848022 Query 21190 TTTTGGTGCGTA-GGGTTAAAGTGCTCGCCGGCGGACGTGCAGCCGTTGCTGGTGTCGCC 21248 | | | | || ||||| |||||| |||| ||| ||||||| ||| || |||| || Sbjct 10848023 TCCTTG-CCATACGGGTTGAAGTGCGGTCCGGACGACATGCAGCCATTGGTGTTGTCTCC 10848081 Query 21249 GAACTCGTGAACGTGAAAGCCGTGCAGTCC 21278 |||||||| ||||| || ||||| || || Sbjct 10848082 AAACTCGTGCACGTGGAATCCGTGGAGACC 10848111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414534304194886