Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20simulans_20[refseq_20GCF_5F000754195.2_202014-09-19]
7,619 sequences; 124,963,774 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq4 95.1 1e-14
>seq4
Length=24153973
Score = 95.1 bits (104), Expect = 1e-14
Identities = 222/330 (67%), Gaps = 5/330 (2%)
Strand=Plus/Plus
Query 20950 ATAATGCCGCAGCCCAGCCGGCCGCCCGAGTTGCCCGTAACCTTGCTAAGCGGGTGGTCT 21009
|||| ||||||||| | ||| | || | ||||||||| |||||| ||| ||| |
Sbjct 10847786 ATAACGCCGCAGCCGATGCGGGCACCAGCGTTGCCCGTTGACTTGCTCAGCTCGTGTCCA 10847845
Query 21010 GTTAAGCCGAGGTCATCGCGATCCGTGTGCACTACCAAGCTACGACCCAATATGCTGAGC 21069
||| || |||||| ||| | |||||| || | | | || || | ||||||
Sbjct 10847846 CCCTGGCCAAGATCATCGGCATCGGCGTGCACGACAACGGTGCGTCCGATGATGCTGTCG 10847905
Query 21070 GGACCAAACAAGCTCATCACGTTGTCGCTCATGTCGACAGGCGTCAGCGCGGTGCAGCCC 21129
| || || | | ||| | |||| | |||| ||| || | || || |||
Sbjct 10847906 GCGCCGAAGAGCGTGATCTTGGAGTCGGTGATGTTGACCTTGGTGGG-GCAGTC--GCCG 10847962
Query 21130 GCGGAGCGGACGTTGCCCAGATCGCCGACGTGCCGCTCTGCGGCGTCGGGAGCGCCGTGA 21189
| || | ||||||||||||||| | ||| || | || || |||||||||||||
Sbjct 10847963 GTGGCCTCAATGTTGCCCAGATCGCCCAGGTGACGGTTCTCGTCGACGGGAGCGCCGTGC 10848022
Query 21190 TTTTGGTGCGTA-GGGTTAAAGTGCTCGCCGGCGGACGTGCAGCCGTTGCTGGTGTCGCC 21248
| | | | || ||||| |||||| |||| ||| ||||||| ||| || |||| ||
Sbjct 10848023 TCCTTG-CCATACGGGTTGAAGTGCGGTCCGGACGACATGCAGCCATTGGTGTTGTCTCC 10848081
Query 21249 GAACTCGTGAACGTGAAAGCCGTGCAGTCC 21278
|||||||| ||||| || ||||| || ||
Sbjct 10848082 AAACTCGTGCACGTGGAATCCGTGGAGACC 10848111
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414534304194886
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |