Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20simulans_20[refseq_20GCF_5F000754195.2_202014-09-19] 7,619 sequences; 124,963,774 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq2 111 2e-19 >seq2 Length=21544594 Score = 111 bits (122), Expect = 2e-19 Identities = 114/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 71717 GAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACT 71776 ||||| ||||| ||||| | | |||||||||||||||||||||||||| || |||||| Sbjct 4549546 GAGGGAAAAATGCACGGCTTTTTGCGCATGTACTGGGCCAAAAAGATTCTGGAATGGACT 4549605 Query 71777 CAAACTCCCGAGCAGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGAC 71836 || || || |||||| | ||||| | || || ||||| | |||||||| || Sbjct 4549606 GCGACACCGGAACAGGCGTTGGAGTACGCGATCCTGCTGAACGACAAGTACAGTCTGGAT 4549665 Query 71837 GGTCGCGATCCTAACGGTTATGTCGGTTG 71865 || ||||| || ||||| |||||||| || Sbjct 4549666 GGACGCGACCCCAACGGCTATGTCGGCTG 4549694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478616813389680