Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20simulans_20[refseq_20GCF_5F000754195.2_202014-09-19]
7,619 sequences; 124,963,774 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq1 253 5e-62
>seq1
Length=23539531
Score = 253 bits (280), Expect = 5e-62
Identities = 1109/1734 (64%), Gaps = 47/1734 (3%)
Strand=Plus/Minus
Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507
|| || |||||||||||| | ||||| || || || || |||||| | |||| | |||
Sbjct 10005165 GAGCGACCGCAGCATATGCTGATGCGCGTGGCGATCGGAATCCATGGAGAGGATATCGAT 10005106
Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACA 363567
|| || | ||||| ||||| ||||| | || ||||| || || |||| |||
Sbjct 10005105 GCAGCCGTGGAAACCTATAATCTTCTGTCGGAGCGCTACTTCACACATGCATCGCCCACA 10005046
Query 363568 ATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAG 363627
||| |||| || || ||| |||| || || || ||||| | |||| |
Sbjct 10005045 CTGTTTGCCGCTGCCACAAACCGGCCGCAGTTGTCGTCGTGTTTCCTTCTGACCATGACG 10004986
Query 363628 GACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAAT 363687
| ||| ||||||||||| || || | | | | | || || | || ||||||
Sbjct 10004985 GCCGACTCCATCGAGGGCATTTTCAAGTCTGTGGAACAATGCGCCATGATCTCCAAGTCC 10004926
Query 363688 GCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCGG 363746
|| || || || || | | || | || |||||||| || || | ||| ||||
Sbjct 10004925 GCCGGTGGCATCGGACTCAACG-TGCATTGCATTCGTGCAAAGGGCACCTCGATTTGCGG 10004867
Query 363747 CACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGA 363805
|||| || |||| | |||||| ||||||||||||| | || ||| | ||| ||
Sbjct 10004866 CACAAATGG-TACTTCCAATGGGTTGGTTCCCATGCTGAGGGTCTTTAATAATGTGGCTC 10004808
Query 363806 GGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTC 363865
| || || || ||||| || || |||||| || || ||||| || ||||| || ||
Sbjct 10004807 GTTATGTGGATCAGGGAGGCGGCAAGCGCCCCGGTGCCTTTGCCATTTATCTGGAACCCT 10004748
Query 363866 ATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGC 363925
|| | ||| | |||||||| || || || ||| |||||||| ||||| || |
Sbjct 10004747 GGCACTCGGATGTCTTTGAGTTCCTGGAACTGAAGAAGAACACGGGCAAAGAAGAGAATC 10004688
Query 363926 GTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGG 363985
| ||||| |||||||| || || || ||| | | || | || ||||| ||||||||||
Sbjct 10004687 GCGCACGCGATCTGTTTTACGCCCTGTGGATACCCGATCTCTTCATGAAACGCGTGGAGG 10004628
Query 363986 C---AGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTAT 364042
| ||| ||||||| ||| | ||||| ||| | ||||||||||| ||| || |
Sbjct 10004627 CCAACGGT---GATTGGTCGCTCATGTGCCCCCACAAGTGTCCAGGTCTCCACGAAGTGT 10004571
Query 364043 GGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGA 364102
|||| || || | | || ||||| || || || ||||| ||| |
Sbjct 10004570 GGGGCGATGAATTCGAAAAGCTGTACGAGAAATACGAGCAAGAGGGTCGGGCCAACCGAA 10004511
Query 364103 CAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACAC 364162
| || || || || |||||||||||||| || |||| | ||||| |||| |
Sbjct 10004510 CGGTTAAGGCTCAATCCCTGTGGTTTGCCATCATTGAGGCGCAAGTGGAGACCGGAAATC 10004451
Query 364163 CCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAA 364222
| || ||| | | ||| || | |||||| | ||| |||||||||| | | || || |
Sbjct 10004450 CGTACATGCTCTTCAAGGACGCTTGCAACAGGAAGAGCAACCAGCAGAATGTAGGCACCA 10004391
Query 364223 TTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCG 364282
|| || |||||| | || || || || ||||||| || | || || |||| ||| |
Sbjct 10004390 TTAAGTGCAGCAACTTGTGCACGGAAATCGTTGAATATTCCTCACCGGATGAGATTGCAG 10004331
Query 364283 TATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA-----AAGATGGTACTTTTGA 364337
| || ||| | || || ||||| || ||| || | ||| | || | |||
Sbjct 10004330 TCTGCAACTTGGCCTCCATCGCCCTCAACATGTTCGTCACGCCGGAGAAG--ACGTATGA 10004273
Query 364338 CCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGA 364397
| || | || | || || || | | ||| ||||| ||||| | || ||
Sbjct 10004272 TTTCAAGAAGCTCAAGGAAGTCACAAAGATAGTTACCAAAAATCTAAACAAGATAATTGA 10004213
Query 364398 CAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGG 364457
| ||||||||||| | || || || | || ||| || | ||||| || | ||
Sbjct 10004212 TATCAATTATTATCCGCTGCCAGAGGCAAGGAAGTCCAATTTGAGGCATCGTCCCGTGGG 10004153
Query 364458 TCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAG---ATGGCATTTGATTC 364514
||||| | ||||| ||||||| | | |||| |||| | | | | ||
Sbjct 10004152 CATTGGTATTCAGGGATTCGCTGATGCCT---TGATTCTCATGCGTTTCCCGTACGAAAG 10004096
Query 364515 GCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGAC 364574
|| || || | | ||| || |||| |||||||| || || | || ||| ||
Sbjct 10004095 CGAAGAAGCCGGTCTCTTGAATCAGCAGATATTTGAAACGATTTACTATGGCGCCTTGGA 10004036
Query 364575 TGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCT 364634
|| || || |||| | ||| | || ||| || || ||||| ||| |
Sbjct 10004035 AGCCAGCTGCGAACTGGCCCAGACCGAAGGTCCATACGAAACCTACGAGGGCAGCCCGGT 10003976
Query 364635 TTCGCAGGGAAAATTCCAGTTTGATCTATGG---AATGTCACGCCATCTGTCCGATGGAA 364691
| |||| || |||| || | ||| || || |||| | || ||| |
Sbjct 10003975 GAGCAAAGGAATTTTGCAGTACGACATGTGGGACAAGGT---GCCAACGAACCTGTGGGA 10003919
Query 364692 CTGGGATACGCT-ACG--TTCCAACGTTAAGAAGCATGGTACTCGCAACTC---CCTCGT 364745
|||| | | | | | |||| |||||||||| ||| || ||||| |||||
Sbjct 10003918 CTGGCAGAAATTGAAGGAGTCCA---TTAAGAAGCACGGTGTCCGGAACTCACTGCTCGT 10003862
Query 364746 TACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGA 364805
| || ||||||||||| || ||||| || ||||| | || ||||| || | ||||||
Sbjct 10003861 T---GCTCCCATGCCCACTGCATCTACAGCTCAGATAATGGGCAACAATGAATCCTTCGA 10003805
Query 364806 ACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAA 364865
|||| || | || | || | || || ||||| ||||| ||||| | ||| || ||
Sbjct 10003804 GCCGTACACCACGAACATATACACCCGGCGAGTTCTGTCCGGCGAATTCCAGGTGGTCAA 10003745
Query 364866 TAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTA 364925
| | | | || || |||| | | |||||| ||| |||||||||| |
Sbjct 10003744 CCATCATTTGTTGCGCGACCTAACCGAACTGGACTTGTGGGACGACGACATGAAGAACCA 10003685
Query 364926 TATCATCGCCGCTAATGGTTCTGTGCAGAACATT-CCAGGAT-TTCCAGAAGATCTGAAG 364983
||||| | | || || | || |||||| | || ||||||| | ||
Sbjct 10003684 GATCATATCGAGCAGGGGATCGATTCAAAACATTGAGACCATACCCCAGAAGGTGCGA-- 10003627
Query 364984 CCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTC-ATTGATATGGCGGCCGA 365042
| | ||||| || || |||||||| | || | | | | ||| | ||||| |||||
Sbjct 10003626 GATCTGTACAAGACGGTGTGGGAAATCT-CAGTCAAGTCCACGATTAAAATGGCCGCCGA 10003568
Query 365043 TCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTC 365102
||| ||||| || || |||||| |||||||| ||| || || | |||||| ||
Sbjct 10003567 TCGTGGTGCGTTCATAGATCAGAGTCAGTCGTTCAACATACATGTGGCCGAGCCAAACTA 10003508
Query 365103 CGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
| ||||| || ||||| || || ||| |||||| | |||||||| || ||
Sbjct 10003507 TGGAAAGCTGACTTCCATACACTTTTACTCCTGGAAAGCAGGTCTTAAAACCGG 10003454
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303226368658058
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |