Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20simulans_20[refseq_20GCF_5F000754195.2_202014-09-19]
7,619 sequences; 124,963,774 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq1 86.0 5e-12
>seq1
Length=23539531
Score = 86.0 bits (94), Expect = 5e-12
Identities = 109/150 (73%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|| || ||||| | |||||| |||||| ||||||||||| || ||||| |||||
Sbjct 10088776 GATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAG 10088835
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| | ||||| | || |||||||| || ||||||| | | | | || || ||||||
Sbjct 10088836 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTATAAC 10088895
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200
||||| || || || || | || || |||
Sbjct 10088896 ATTCAGAAGGAGTCCACTCTGCACTTGGTG 10088925
Score = 82.4 bits (90), Expect = 7e-11
Identities = 126/180 (70%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 131863 CACGGTGAATTGAATTGTATTCGCAGCAGGCTTAGTTCTTAAATAATACATGCCCGTCTT 131922
||||||||| ||||| | ||||||||| ||||| || | | ||| ||||| || || ||
Sbjct 10003402 CACGGTGAACTGAATGGCATTCGCAGCTGGCTTGGTGCGCAGATAGTACATTCCGGTTTT 10003461
Query 131923 CAAGCCTTTCTCCCAAGAATAATTGTGTATGGACGATAAAATTTTGTAGCTGGGATTGGC 131982
| ||| | ||| || ||| ||||||||| | | || ||| | || | |||
Sbjct 10003462 AAGACCTGCTTTCCAGGAGTAAAAGTGTATGGAAGTCAGCTTTCCATAGTTTGGCTCGGC 10003521
Query 131983 CACAAACAGATTGAGCGATTGACTCTGATCGATGTAAGGTCCCCTGTCTGCGGCCATATT 132042
|||| | |||| ||| ||||||||||| ||| | | || | || |||||||| ||
Sbjct 10003522 CACATGTATGTTGAACGACTGACTCTGATCTATGAACGCACCACGATCGGCGGCCATTTT 10003581
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429896077620945
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |