Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20simulans_20[refseq_20GCF_5F000754195.2_202014-09-19]
7,619 sequences; 124,963,774 total letters
Query= NC_008953.1
Length=3935
Score E
Sequences producing significant alignments: (Bits) Value
seq9 95.1 3e-16
>seq9
Length=20829647
Score = 95.1 bits (104), Expect = 3e-16
Identities = 109/147 (74%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 3334 CCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCG 3393
|||||| ||| |||||||| | |||| ||| || || |||||||||||||| ||
Sbjct 6482918 CCCATGGCGCGGGTCTTTCCGAAGGTCACCAAATGCACGTTCCACAAATACGGTCCATCC 6482977
Query 3394 GGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAG 3453
||| || | | | |||| || || ||| | || || |||| | |||||||| |||
Sbjct 6482978 GGCAGTGTGCAGACCCACGACGGTCTGTGCGTGCTTCCCCTGAACATTGTCAACGAAAAG 6483037
Query 3454 ATCTACATTTTCCTCTGGTTCTGGTTC 3480
|||||| | ||||| ||||||||||||
Sbjct 6483038 ATCTACGTGTTCCTGTGGTTCTGGTTC 6483064
Score = 82.4 bits (90), Expect = 2e-12
Identities = 87/115 (76%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 3367 TGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATC 3426
|| || || ||||| || ||||| || || || ||| | || |||| |||||||||
Sbjct 6458277 TGCACCTTCCACAAGTATGGTCCCTCCGGTTCGCTGCAGAAGCACGACTCCCTCTGCATC 6458218
Query 3427 CTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTCT 3481
|| ||| ||| | || |||||||||| ||| ||||| |||||||||||||||
Sbjct 6458217 CTGCCGCTAAACATCGTGAACGAGAAGACGTACGTTTTCATCTGGTTCTGGTTCT 6458163
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 12478960006500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |