Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20simulans_20[refseq_20GCF_5F000754195.2_202014-09-19] 7,619 sequences; 124,963,774 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq5 89.7 6e-13 >seq5 Length=27160941 Score = 89.7 bits (98), Expect = 6e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 154948 ATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAAC 155007 |||| || ||||| || | |||||||| || | ||||| ||||| ||||| || Sbjct 14981375 ATGGCGGACAGGTGTACTTGGATGGAGCCAACATGAATGCCCAGGTTGGACTGTGTCGAC 14981316 Query 155008 CATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCAC 155067 | | || ||||| ||||| | |||||| ||| | || || || ||||| ||||| | Sbjct 14981315 CTGGAGATTATGGCAGCGATGTTTCTCATCTCAACCTGCACAAGACCTTCTGCATTCCGC 14981256 Query 155068 ATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 |||||||||| |||||||| | ||||| || || || Sbjct 14981255 ATGGAGGTGGTGGTCCTGGAATGGGTCCCATCGGCGT 14981219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579157637220960