Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20simulans_20[refseq_20GCF_5F000754195.2_202014-09-19] 7,619 sequences; 124,963,774 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq3096 96.9 3e-14 >seq3096 Length=592 Score = 96.9 bits (106), Expect = 3e-14 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 550394 ACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAA 550453 ||||||||||| || || || ||||| || || || ||||| || || || ||||| ||| Sbjct 152 ACGGATGCAGTCATCACAGTTCCAGCCTACTTCAACGACTCCCAGCGCCAGGCTACCAAA 93 Query 550454 GATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCT 550513 || || || | || || || || ||||| || || || |||||||| || || || || Sbjct 92 GACGCCGGTCACATCGCCGGCCTGAATGTGCTCCGCATCATCAATGAGCCCACGGCGGCA 33 Query 550514 GCACTTGCATATGGACTTGATAA 550536 ||||| || || ||||| || || Sbjct 32 GCACTGGCCTACGGACTGGACAA 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028893072918310