Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20simulans_20[refseq_20GCF_5F000754195.2_202014-09-19]
7,619 sequences; 124,963,774 total letters
Query= NC_018874.1
Length=211518
Score E
Sequences producing significant alignments: (Bits) Value
seq2 129 8e-25
>seq2
Length=21544594
Score = 129 bits (142), Expect = 8e-25
Identities = 193/271 (71%), Gaps = 5/271 (2%)
Strand=Plus/Minus
Query 197022 CAGATCCTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGTTGTC 197081
||| ||||| || | |||||||| || ||||| || ||| | ||| || ||| ||
Sbjct 20242953 CAGGTCCTCATCAGTGAAGCCCGTTCCAATCTTGCATATGCTCTGATACTCCTCGTTCTC 20242894
Query 197082 GGGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTT 197141
|| | || ||||| || || || | ||||||||||| |||| | ||| || ||
Sbjct 20242893 GGTGTCATAGCAGGCAAGCAAAAATCCTCCGTAGGTTCCAGTTCGCCGGCCCTTGCCTTT 20242834
Query 197142 GAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCAT--GTAATCTTTC 197199
| |||| || || ||||||| ||| || | ||||| || || || ||| || |||
Sbjct 20242833 GTAGCCGCCAATGACCACCAAATCGAGTGAGTCGCCTACA--TTGGATAGGTAGTCCTTC 20242776
Query 197200 TTCAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGG 197259
|||| ||| |||||| | | ||||||||||||||||| ||||| || | | ||||
Sbjct 20242775 TTCAATTTCAGCCAGTTGCGGGATCTCTTGGCAATCTCATAGGTGGCCTCCTCATCCAAA 20242716
Query 197260 GTCTTGATCATCAATCCCTCGCAATCTTCCT 197290
|| |||| ||| | |||||||||| |||||
Sbjct 20242715 GTTTTGACCATGAGGCCCTCGCAAT-TTCCT 20242686
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 676665149964720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |