Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20simulans_20[refseq_20GCF_5F000754195.2_202014-09-19]
7,619 sequences; 124,963,774 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq1 91.5 1e-13
seq4 87.8 2e-12
>seq1
Length=23539531
Score = 91.5 bits (100), Expect = 1e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316
||||| || || || ||||| |||||||||| |||||||| ||||| || |||||||||
Sbjct 10088870 TCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTG 10088811
Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376
|| ||| || ||| | | ||| | || || | ||||| || |||| ||| |
Sbjct 10088810 TCCTGAATCTTGGCTTTGACATTTTCGATAGTATCCGACGGTTCGACCTCAAGAGTGATG 10088751
Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
|||||||| || | || || ||||| || |||||
Sbjct 10088750 GTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCAT 10088716
>seq4
Length=24153973
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
||||| || | ||| | || || |||| || || || || || |||||||||||| |
Sbjct 3789601 CCTCCACGGAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAATCGGAC 3789660
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| |||| |||||| ||||| || || || |||||||||| |||||||| || ||
Sbjct 3789661 AGGGTGCGTCCGTCTTCCAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGG 3789720
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
|| || || || || ||| || || | | || | ||||| | || || ||
Sbjct 3789721 ATTCCCTCCTTATCCTGAATCTTGGCCTTCACATTCTCAATGGTGTCCGATGGCTCAACC 3789780
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 137415
|| | ||| | |||||||| || | || || ||||| || |||||| ||
Sbjct 3789781 TCCAAAGTGATGGTCTTGCCAGTGAGAGTCTTCACGAAGATCTGCATACCT 3789831
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488497472290800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |