Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20simulans_20[refseq_20GCF_5F000754195.2_202014-09-19]
7,619 sequences; 124,963,774 total letters
Query= NC_025963.1
Length=139981
Score E
Sequences producing significant alignments: (Bits) Value
seq1 86.0 6e-12
>seq1
Length=23539531
Score = 86.0 bits (94), Expect = 6e-12
Identities = 151/216 (70%), Gaps = 8/216 (4%)
Strand=Plus/Minus
Query 5333 AGAAGCACTCGCAGATGAGCTGCGCCACGCGGTCGCCTCGCCGCACCACGAAGGTC---- 5388
||| || |||||| |||| ||| || | ||||||||| || |||| | || ||
Sbjct 10669137 AGATGCGCTCGCAAATGAACTGGGCGATGCGGTCGCCATGCTTCACCTCAAAA-TCAACA 10669079
Query 5389 TCTTGGCCGAAGTTGAAGAGCACCACTCCCAGGTTCCCTCGGAAGTCCGGGTCCACGACG 5448
||| | || |||||||| || || || || || || || | ||| ||| || ||
Sbjct 10669078 TCTGAGT-GA--TTGAAGAGGACGACGCCGAGATTGCCGCGATAATCCTCGTCGACCACA 10669022
Query 5449 CCCGCTCCCACATCCACGAAGTTGTTTACCGCGAGACCGGACCTCGGCGCCACGCGACCG 5508
|| || |||||||| | |||||| || ||||| || ||||| | || || ||||| |||
Sbjct 10669021 CCGGCGCCCACATCAATGAAGTTCTTCACCGCTAGCCCGGATCGTGGGGCTACGCGTCCG 10668962
Query 5509 TAGCAGCCGTATGGCGGGTGGATCTGCAGATCGGTC 5544
||| |||| | || || | ||||||||||||
Sbjct 10668961 TAGGAGCCCTCCGGAACCTGCACTTGCAGATCGGTC 10668926
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447768551580840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |