Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20simulans_20[refseq_20GCF_5F000754195.2_202014-09-19]
7,619 sequences; 124,963,774 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq5 205 3e-47
seq1 178 4e-39
seq4 159 1e-33
seq671 149 2e-30
seq9 118 3e-21
>seq5
Length=27160941
Score = 205 bits (226), Expect = 3e-47
Identities = 935/1469 (64%), Gaps = 24/1469 (2%)
Strand=Plus/Minus
Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258
||||| ||||||||||| || || ||||| || || |||| || | ||| | |
Sbjct 19422031 GCTATTGGAATCGATTTGGGCACCACTTACTCCTGCGTTGGAGTCTTCCAACACGGAAAA 19421972
Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318
|| || || ||||| || || || |||||| | || || ||||| ||||| || || |||
Sbjct 19421971 GTGGAGATCATTGCCAACGACCAGGGTAACCGTACCACTCCATCGTACGTGGCCTTCACC 19421912
Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378
|| | || || | || || ||| | || || || || | || || || | ||
Sbjct 19421911 GACTCGGAACGCCTTATCGGAGATGCCGCCAAGAACCAGGTGGCCATGAACCCCAGGAAC 19421852
Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438
| || || ||||| ||||| || ||||| | ||||| ||| | || || |||
Sbjct 19421851 TCTGTGTTCGATGCCAAGCGTCTGATTGGGCGTCGTTTT---GACGATTC--CAAGATCC 19421797
Query 349439 -----GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTA 349493
|| ||||||| | || || | || | || || || | || |||| |
Sbjct 19421796 AGGACGACATAAAACACTGGCCGTTCAAAGT-GATC--AACGATAACGGCAAGCCAAAGA 19421740
Query 349494 TTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGG 349553
| ||||| | || || | | || || | ||||| || ||| || ||||
Sbjct 19421739 TAAGCGTTGAGTTCAAGGGCGCGGATAAGTGTTTCTCTCCCGAGGAGATTAGCTCGATGG 19421680
Query 349554 TTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTG 349613
| | ||||||||||||| ||| ||||| || | || ||||| | || ||||
Sbjct 19421679 TACTCACCAAAATGAAGGAAACTGCAGAAGCCTACCTGGGCACCACAGTGAAGGACGCTG 19421620
Query 349614 TTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCA 349673
| || ||||| || ||||| || || || ||||||| |||||||| ||||| ||
Sbjct 19421619 TCATCACTGTGCCGGCCTACTTCAACGACTCCCAGCGCCAGGCAACAAAGGATGCCGGTG 19421560
Query 349674 GCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCAT 349733
||| || || | ||||| || | || || || || || || || || || | || |
Sbjct 19421559 CCATCGCTGGCATTAATGTGCTTCGCATCATCAACGAGCCAACAGCGGCGGCTCTGGCCT 19421500
Query 349734 ATGGGCTTGATAA-AATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792
| || || || || ||| | | ||| ||| | |||||||| || | || |||
Sbjct 19421499 ACGGCCTGGACAAGAATCTG-AAGGGAGAGCGCAATGTGCTTATTTTCGACCTGGGCGGT 19421441
Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA---ATTTTTGAAGTTAAAGCA 349849
||||||||||| || || | | || |||| |||||| | ||||| || |
Sbjct 19421440 GGTACTTTTGACGTCTCCATCTTGACCATTGACGAGGGATCCCTGTTTGAGGTGCGCTCC 19421381
Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909
||||| || || || ||||| ||||| || || ||||| || || | ||| || |||
Sbjct 19421380 ACTGCGGGAGACACCCATCTGGGTGGCGAGGACTTTGACAACCGCTTGGTTAACCACTTT 19421321
Query 349910 GTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATCCTAGAGCAATGCG 349968
| | ||||||||||| |||| |||| ||| | | || || | ||| ||||
Sbjct 19421320 GCCGAGGAATTTAAGCG-CAAGTACAAAAAGGATCTGCGCTCCAACCCACGCGCACTGCG 19421262
Query 349969 TCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTC 350028
|||||| | ||||| || || || ||||| || | || || | || | | ||
Sbjct 19421261 TCGCCTTCGCACTGCAGCCGAGCGCGCAAAGCGCACCCTTTCCTCCAGCACGGAGGCTTC 19421202
Query 350029 TATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCG 350088
| | || ||||| | || || || | || |||| || | | || || |
Sbjct 19421201 TTTGGAGATTGACGCCCTGTACGAGGGACACGACTTCTACTCGAAGGTGAGCCGCGCCAG 19421142
Query 350089 GTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATT 350148
|| || ||| | || || || || | ||| |||| || || || || | | |
Sbjct 19421141 ATTCGAGGAACTTTGCGGTGACCTCTTCCGCAACACACTGGAGCCAGTTGAGAAGGCACT 19421082
Query 350149 AAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTAC 350208
||||| || |||||| ||| | ||||| | || |||| || ||||| || |||||
Sbjct 19421081 CAAAGACGCCAAAATGGACAAGAGCCAGATCCACGACATAGTCTTGGTTGGAGGCTCTAC 19421022
Query 350209 ACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCT--TCT 350266
|||||||| || ||||| | | || | || || || | ||||| ||| ||
Sbjct 19421021 TCGTATTCCCAAGGTTCAGAACCTGCT-GCAGAACTTCTTCGGCGGAAAGACCCTGAACT 19420963
Query 350267 AGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTA 350326
| ||||| ||||| || || || || || || || || || | |||||| | ||| |
Sbjct 19420962 TG-TCAATCAATCCGGACGAGGCGGTGGCCTACGGAGCAGCCATCCAGGCAGCCATTCTG 19420904
Query 350327 TCTGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCG 350386
|| || | |||| | || | || | |||| | ||||| | ||||| |||
Sbjct 19420903 TCGGGCGACGAGAGCAGCGAGATCAAGGACGTTCTACTGGTCGATGTTGCCCCACTCTCG 19420844
Query 350387 CTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTA 350446
| || ||||||| | || | || ||||| || ||| | || || |
Sbjct 19420843 TTGGGCATAGAAACCGCCGGCGGGGTGATGACCAAGCTGATTGAGCGCAACAGCCGCATT 19420784
Query 350447 CCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATT 350506
|| || ||||| | || || | || | || || || ||||| ||||| || |||
Sbjct 19420783 CCGTGCAAGCAGTCCAAGACCTTCACCACCTACGCCGACAACCAGCCGGCGGTGACTATT 19420724
Query 350507 CAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACC 350566
||||| ||||| || || | |||| ||||| || || ||| | | || ||| | |
Sbjct 19420723 CAAGTGTTTGAGGGCGAGAGGGCTCTGACTAAGGACAACAATGTATTGGGCACATTCAAC 19420664
Query 350567 CTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATT 350626
|| | || ||||| || || | ||||| || |||| || ||| |||| ||| |
Sbjct 19420663 CTCACTGGCATTCCGCCCGCACCCCGTGGAGTGCCCAAGATCGACGTCACTTTTGATTTG 19420604
Query 350627 GATTCAAATGGTATTTTAAATGTTACCGC 350655
|| |||| ||||| ||||||| |||||
Sbjct 19420603 GACGCAAACGGTATCCTAAATGTGACCGC 19420575
Score = 129 bits (142), Expect = 2e-24
Identities = 722/1139 (63%), Gaps = 30/1139 (3%)
Strand=Plus/Plus
Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258
||||| ||||||||| | || || || || || || || | ||| | ||| |||
Sbjct 13323193 GCTATTGGAATCGATCTGGGCACCACCTACTCCTGCGTGGGTGTCTACCAACATGGCAAG 13323252
Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318
|| || || || || || || || || ||| | || ||||| || ||||| || || ||
Sbjct 13323253 GTGGAGATTATCGCCAACGACCAGGGCAACCGCACCACGCCGTCCTACGTGGCTTTCACA 13323312
Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378
|| | || || |||| || ||| | || || || || | || || || | |||
Sbjct 13323313 GATTCGGAACGCCTGATCGGCGATCCGGCCAAGAACCAGGTGGCCATGAACCCCAGAAAC 13323372
Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACACA 349434
|| || || || || |||||||| || || ||| | ||| | ||| || |
Sbjct 13323373 ACAGTGTTCGACGCCAAGCGACTCATCGGCCGAAAATACGACGACCCCAAGATCG-CAGA 13323431
Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494
|| | || || | ||||| | || || || ||||| | || || | ||
Sbjct 13323432 G---GACATTAAGCACTGGCCTTTCAAGGTGGT---AAGCGACGGCGGAAAGCCCAAGAT 13323485
Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554
| ||| || ||||| ||||| || |||| ||||||||||| ||||||||
Sbjct 13323486 CGGGGTGGAGTATAAGGGTGAGTCCAAGAGATTTGCCCCCGAAGAAATCAGCTCAATGGT 13323545
Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614
| || || |||||||| | || || || ||| | || || | | || ||||| ||
Sbjct 13323546 GCTGGTCAAGATGAAGGAGACGGCGGAGGCGTATCTGGGAGAGAGCATCACAGATGCAGT 13323605
Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674
|| || || |||||||| || || || ||||||| || || ||||| |||||
Sbjct 13323606 CATCACAGTTCCAGCCTACTTCAACGACTCCCAGCGCCAGGCTACCAAAGACGCTGGTCA 13323665
Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734
|| || || | ||||| || | || || ||||| ||||| || |||||| | || ||
Sbjct 13323666 TATCGCCGGCCTGAATGTGCTCCGCATCATCAATGAGCCCACGGCGGCAGCACTGGCCTA 13323725
Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794
|| || || || | | || ||| | ||||| || || || || || ||
Sbjct 13323726 CGGACTGGACAAGAACCTCAAGGGTGAGCGCAATGTGCTTATCTTCGACTTGGGCGGCGG 13323785
Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGG---AATTTTTGAAGTTAAAGCAAC 349851
|| || ||||| || | || || | || ||||| | | || || || | ||
Sbjct 13323786 CACCTTCGATGTCTCCATCCTGACCATCGACGAGGGATCACTGTTCGAGGTGCGCTCCAC 13323845
Query 349852 TGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGT 349911
|| || || ||||| | || || || || ||||| || || || ||| | || | |
Sbjct 13323846 AGCCGGAGACACACACTTGGGCGGCGAGGACTTTGACAACCGGCTAGTTACCCACCTGGC 13323905
Query 349912 TAAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTC 349970
| || || ||||| |||| || | ||| | | || ||| | || | || |
Sbjct 13323906 GGAGGAGTTCAAGCG-CAAGTACAAGAAGGATCTGCGCTCCAACCCTCGCGCCCTACGAC 13323964
Query 349971 GCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTA 350030
|||| ||||| || |||||| || |||||| | | || || | || | || | |
Sbjct 13323965 GCCTCAGAACAGCAGCTGAACGGGCCAAGCGTACACTCTCCTCCAGCACGGAGGCCACCA 13324024
Query 350031 TTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTA--TTACACGTGCTCG 350088
| || || || | | ||| || | || ||| | || | | | | || || |
Sbjct 13324025 TCGAGATCGACGCATTGTTTGAGGGTCAGGACTTC--TACACCAAAGTGAGCCGCGCCAG 13324082
Query 350089 GTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACA--ATGGATCCTGTGGAAAAAGTA 350146
|||||| || | || ||| || || |||||| || | |||||||| || |
Sbjct 13324083 GTTTGAGGAGCTGTGCGCGGACCTCTT--CCGCAACACCCTGCAGCCTGTGGAGAAGGCC 13324140
Query 350147 TTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCT 350206
| || ||||| || ||| ||| |||||| | || | || | || || || ||
Sbjct 13324141 CTCAACGATGCTAAGATGGACAAGGGTCAGATCCACGACATCGTGCTCGTCGGCGGATCC 13324200
Query 350207 ACACGTATTCCAAAAGTTCAACAGT-TACTATCTGAGTTTTTTAATGGCAAAGAACCTTC 350265
|| || ||||| || || ||| ||| | || ||||| || | ||| ||||||| ||
Sbjct 13324201 ACTCGCATTCCCAAGGTACAA-AGTCTGCTGCAGGAGTTCTTCCACGGC-AAGAACC-TC 13324257
Query 350266 TA--GATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTAT 350322
| ||| || || ||||| || || || ||||| || |||||||| ||||| ||||
Sbjct 13324258 AACCTATCCATCAACCCAGACGAGGCAGTGGCATACGGAGCTGCTGTGCAGGCCGCTAT 13324316
Score = 84.2 bits (92), Expect = 7e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 235889 GGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAA 235948
||||||||||| ||| ||||||| ||||||||| ||||| ||||||||| |||||| |
Sbjct 7785189 GGGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACGGGGATCGAT 7785130
Query 235949 ACCCAGCATCTCCA 235962
||| |||||||||
Sbjct 7785129 GCCCCGCATCTCCA 7785116
>seq1
Length=23539531
Score = 178 bits (196), Expect = 4e-39
Identities = 176/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569
||||||||| | | || || | || ||||| ||||| || ||||| ||||| |||||
Sbjct 10088943 ACCACCACGCAGGCGGAGCACCAAGTGCAGAGTGGACTCCTTCTGAATGTTATAGTCAGA 10088884
Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629
| || || |||||||| || || || ||||| ||||| ||||| |||||||| |||||
Sbjct 10088883 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGG 10088824
Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689
|||||||||||| |||||||| || ||||| ||||| || || | ||| || ||||| ||
Sbjct 10088823 AATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCCGACGGTTCGAC 10088764
Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| || | ||||| || || || || || || || ||||||||
Sbjct 10088763 CTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCAT 10088716
Score = 131 bits (144), Expect = 5e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567
||||||||||| | | || || | || || || ||||| || || || || || ||
Sbjct 4075145 ATACCACCACGCAGGCGGAGCACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCG 4075086
Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627
|| | || || ||||| || || || || || || ||||| ||||| |||||||| ||
Sbjct 4075085 GACAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGG 4075026
Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687
||||| || || |||||||| || ||||| || ||||| || || | ||||| || ||
Sbjct 4075025 GGAATGCCCTCCTTATCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCAGAAGGCTCC 4074966
Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || | || | ||||| ||||| || ||||| || || ||||||||
Sbjct 4074965 ACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATCTGCAT 4074916
>seq4
Length=24153973
Score = 159 bits (176), Expect = 1e-33
Identities = 701/1103 (64%), Gaps = 20/1103 (2%)
Strand=Plus/Plus
Query 349577 GCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTT 349636
|| || || ||||| || | | || || ||||| || | || || || || || ||
Sbjct 13640415 GCGGAGGCCTATTTGGGCGGCTCGGTGACAGATGCGGTGGTCACCGTTCCGGCGTACTTC 13640474
Query 349637 AATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTA 349696
|| || ||||||| || || || ||||| || ||||||||| || ||||| ||
Sbjct 13640475 AACGACTCCCAGCGCCAGGCCACCAAGGATGCGGGTGCCATTGCGGGATTGAATGTCCTT 13640534
Query 349697 AGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGAC 349756
| || || || ||||| || || || || || || || || | ||||| | | ||
Sbjct 13640535 CGCATTATCAACGAACCAACGGCGGCGGCCATAGCCTACGGCTTGGATAAGCAGGGC-AC 13640593
Query 349757 CAA-GaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACT 349815
|| ||| |||| | || || || || | ||||||||||| || || ||||| | ||
Sbjct 13640594 CAGCGAACGAAATGTCCTGATCTTCGACCTTGGTGGTGGTACCTTCGACGTATCCGTGCT 13640653
Query 349816 AACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGG 349875
|| | || || || || || || || || || || ||||| || || ||||| || ||
Sbjct 13640654 GACCATCGAGGATGGCATCTTCGAGGTGAAGGCCACCGCTGGCGACACCCATCTCGGCGG 13640713
Query 349876 AGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAA 349935
|||||| || ||||| || || || || || || | || ||| |||| || |||
Sbjct 13640714 AGAAGACTTCGATAACCGACTGGTAAACCACTTCGTACAGGAGTTTCAGCGCAAACATAA 13640773
Query 349936 AATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGC 349995
| ||| | || | || | || || | || || | || || || ||| | ||
Sbjct 13640774 GAAGGATCTGGGCCAGAACAAGCGTGCCTTGAGGCGACTCCGCACCGCCTGCGAAAGGGC 13640833
Query 349996 TAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGG 350055
||||| | | || || | || || || || || || ||||| || ||| ||
Sbjct 13640834 AAAGCGCACGCTCTCCTCGTCCACGCAGGCCAGCATCGAGATCGATTCCCTCTTTGAGGG 13640893
Query 350056 CAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATG--GATCTT 350113
| || |||| | || | ||||| || || || ||||| | || ||| |||||
Sbjct 13640894 CGTCGACTTCTACACCTCGGTGACACGAGCCCGCTTCGAAGAGT--TGAATGGCGATCTG 13640951
Query 350114 TTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAAT 350173
|| | | || ||||| || |||| || | | ||||| || ||| |||
Sbjct 13640952 TTCCGTGGTACCATGGAACCCGTGGCCAAGGCGCTGCGCGATGCCAAGATGGACAAGGGC 13641011
Query 350174 CAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTA 350233
||||| | || | || | || ||||| || || | ||||| ||||| |||| |
Sbjct 13641012 CAGATACACGACATCGTCCTTGTGGGTGGCTCCACCAGGATTCCCAAAGTGCAACGCCTG 13641071
Query 350234 CTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGA----TCAATTAATCCAGATGAAGC 350289
|| || || || || ||||| || |||| | || |||||||| ||||| ||
Sbjct 13641072 CTGCAGGACTTCTTCAACGGCAAGGA----TCTAAACAAGTCCATTAATCCCGATGAGGC 13641127
Query 350290 TGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAAGAGTTCTAA--- 350346
|| || ||||||||||| || ||||| | || | ||| || | || |
Sbjct 13641128 GGTGGCCTATGGTGCTGCAGTGCAGGCTGCCATCCTCCATGGCGAT---ACATCGGAGGC 13641184
Query 350347 AATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAGAAACTTCTGG 350406
| | | ||||| | || || ||||| ||||| || || || || | || || ||||
Sbjct 13641185 AGTGCAGGATCTGCTCCTGCTGGATGTCACTCCTCTGTCTCTGGGTATTGAGACCGCTGG 13641244
Query 350407 TGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAAAAGTCCCAAAC 350466
|| ||| ||||| || ||| || || | || |||| || || | | ||||
Sbjct 13641245 TGGAGTGATGACCACACTGATTAAGAGGAACACCACCATACCCACCAAGCAAACGCAAAT 13641304
Query 350467 TTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTTGAAGGTGAACG 350526
||| | || | ||| || || ||||||| || || || || || || ||||| ||
Sbjct 13641305 CTTTACCACTTATGCGGACAACCAGCCAGGTGTGCTTATCCAGGTGTTCGAGGGTGAGCG 13641364
Query 350527 TGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGAAATTCCACCAAT 350586
|| || ||||| || | || || | ||| || | |||||||||
Sbjct 13641365 GGCGATGACGCGGGATAACAACAGCCTGGGTAAGTTTGAACTCTCGGCAATTCCACCGGC 13641424
Query 350587 GCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAATGGTATTTTAAA 350646
|| | ||||| || ||| | || || | || || || ||| | ||||| || | ||
Sbjct 13641425 TCCACGCGGAGTGCCCCAGGTGGAGGTGACCTTTGACATCGATGCCAATGGAATACTCAA 13641484
Query 350647 TGTTACCGCAGTTGAAAAATCAA 350669
||| || ||| | ||||| ||||
Sbjct 13641485 TGTGACGGCACTGGAAAAGTCAA 13641507
Score = 138 bits (152), Expect = 3e-27
Identities = 156/208 (75%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589
|||| ||||| || ||||| || || || || ||||| || | || || || ||||| |
Sbjct 3789621 CAAG-TGAAGGGTTGACTCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCGTCTTCCA 3789679
Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649
|||| || || || ||||| ||||| |||||||| || || ||||| || ||||||||||
Sbjct 3789680 GTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATTCCCTCCTTATCCTGAA 3789739
Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709
| || || || ||||| ||||| | || ||||| ||||| || | || | ||||| |
Sbjct 3789740 TCTTGGCCTTCACATTCTCAATGGTGTCCGATGGCTCAACCTCCAAAGTGATGGTCTTGC 3789799
Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737
| || || || || || || ||||||||
Sbjct 3789800 CAGTGAGAGTCTTCACGAAGATCTGCAT 3789827
Score = 132 bits (146), Expect = 1e-25
Identities = 176/248 (71%), Gaps = 16/248 (6%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||| || || | | ||||| | ||||| || ||||| || || || || |||||
Sbjct 3789825 CATACCTCCTCGCAGACGGAGAACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAATC 3789884
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTT----------------TCCAGCAAAGATTA 140610
|| | || || || ||||| ||||| || ||| || ||||| |
Sbjct 3789885 GGACAGGGTGCGTCCGTCTTCCAGTTGCTTGCCGGTGGATGAGGCTTCCGGCGAAGATCA 3789944
Query 140611 GACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAA 140670
|||| |||||||| || |||||||| || ||||||||||| ||||| || ||||| ||||
Sbjct 3789945 GACGCTGCTGATCTGGGGGAATTCCCTCCTTATCCTGAATCTTAGCCTTAACATTCTCAA 3790004
Query 140671 TCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAA 140730
| | ||||| || || || || || || | ||||||||||| | || || ||||| |
Sbjct 3790005 TGGTGTCAGACGGCTCTACCTCGAGGGTGATGGTCTTTCCGGTCAAGGTCTTCACAAAGA 3790064
Query 140731 TCTGCATT 140738
||||||||
Sbjct 3790065 TCTGCATT 3790072
>seq671
Length=216
Score = 149 bits (164), Expect = 2e-30
Identities = 157/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | ||||| | ||||| || ||||| || || || || || ||
Sbjct 8 CATACCACCACGCAGACGGAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTC 67
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
||| | || || ||||| || || || || || || ||||| ||||| |||||||| ||
Sbjct 68 AGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGG 127
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||||||||| || || || || || ||||| || ||||| ||||| | || ||||| ||
Sbjct 128 AGGAATTCCCTCCTTGTCTTGGATCTTAGCCTTCACATTCTCAATGGTGTCTGATGGCTC 187
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGT 140713
|||||| || || | |||||||||||
Sbjct 188 AACTTCCAGGGTGATGGTCTTTCCGGT 214
>seq9
Length=20829647
Score = 118 bits (130), Expect = 3e-21
Identities = 246/365 (67%), Gaps = 5/365 (1%)
Strand=Plus/Minus
Query 349531 ACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTT 349590
|||||| || || || | |||||| | | || |||||||||| ||||| || ||| |
Sbjct 11066542 ACCCGAGGAGATCTCCGCCATGGTTCTGGGCAAGATGAAGGAAACCGCTGAGGCCTATCT 11066483
Query 349591 AGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCG 349650
|| | | || || |||| || |||| || |||||||| || || |||||||||||
Sbjct 11066482 GGGCAAGAAGGTCACCCATGCCGTCGTTACCGTGCCAGCCTACTTCAACGATGCCCAGCG 11066423
Query 349651 TTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGA 349710
| || || || |||||||| ||||| || | | || | | || || || ||
Sbjct 11066422 TCAGGCCACCAAGGATGCTGGTGTGATTGCCGGTCTGCAGGTGATGCGCATCATCAACGA 11066363
Query 349711 ACCCACTGCTGCAGCAATTGCATATGGGCTTGATAA-AATGAGTGACCAAGaaaaaaaTA 349769
|||||||||||| || ||||| || || || || || || ||| | || || ||
Sbjct 11066362 ACCCACTGCTGCGGCTATTGCCTACGGTCTGGACAAGAAGGAGGG----CGAGAAGAACG 11066307
Query 349770 TTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGG 349829
| ||| | || ||||| || || || || || ||||| || || || || | || | |
Sbjct 11066306 TGCTTGTGTTCGATTTGGGCGGCGGCACCTTCGATGTCTCCCTGCTGACCATCGATAACG 11066247
Query 349830 GAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATA 349889
|| | || || || || || |||||||| ||| | || || || || || |||
Sbjct 11066246 GAGTGTTCGAGGTGGTGGCCACCAACGGTGATACTCATTTGGGAGGTGAGGACTTCGATC 11066187
Query 349890 ATCGT 349894
| |||
Sbjct 11066186 AGCGT 11066182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515106483233057
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |