Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20simulans_20[refseq_20GCF_5F000754195.2_202014-09-19] 7,619 sequences; 124,963,774 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq5 205 3e-47 seq1 178 4e-39 seq4 159 1e-33 seq671 149 2e-30 seq9 118 3e-21 >seq5 Length=27160941 Score = 205 bits (226), Expect = 3e-47 Identities = 935/1469 (64%), Gaps = 24/1469 (2%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||||| ||||||||||| || || ||||| || || |||| || | ||| | | Sbjct 19422031 GCTATTGGAATCGATTTGGGCACCACTTACTCCTGCGTTGGAGTCTTCCAACACGGAAAA 19421972 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || ||||| || || || |||||| | || || ||||| ||||| || || ||| Sbjct 19421971 GTGGAGATCATTGCCAACGACCAGGGTAACCGTACCACTCCATCGTACGTGGCCTTCACC 19421912 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || | || || | || || ||| | || || || || | || || || | || Sbjct 19421911 GACTCGGAACGCCTTATCGGAGATGCCGCCAAGAACCAGGTGGCCATGAACCCCAGGAAC 19421852 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438 | || || ||||| ||||| || ||||| | ||||| ||| | || || ||| Sbjct 19421851 TCTGTGTTCGATGCCAAGCGTCTGATTGGGCGTCGTTTT---GACGATTC--CAAGATCC 19421797 Query 349439 -----GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTA 349493 || ||||||| | || || | || | || || || | || |||| | Sbjct 19421796 AGGACGACATAAAACACTGGCCGTTCAAAGT-GATC--AACGATAACGGCAAGCCAAAGA 19421740 Query 349494 TTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGG 349553 | ||||| | || || | | || || | ||||| || ||| || |||| Sbjct 19421739 TAAGCGTTGAGTTCAAGGGCGCGGATAAGTGTTTCTCTCCCGAGGAGATTAGCTCGATGG 19421680 Query 349554 TTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTG 349613 | | ||||||||||||| ||| ||||| || | || ||||| | || |||| Sbjct 19421679 TACTCACCAAAATGAAGGAAACTGCAGAAGCCTACCTGGGCACCACAGTGAAGGACGCTG 19421620 Query 349614 TTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCA 349673 | || ||||| || ||||| || || || ||||||| |||||||| ||||| || Sbjct 19421619 TCATCACTGTGCCGGCCTACTTCAACGACTCCCAGCGCCAGGCAACAAAGGATGCCGGTG 19421560 Query 349674 GCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCAT 349733 ||| || || | ||||| || | || || || || || || || || || | || | Sbjct 19421559 CCATCGCTGGCATTAATGTGCTTCGCATCATCAACGAGCCAACAGCGGCGGCTCTGGCCT 19421500 Query 349734 ATGGGCTTGATAA-AATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 | || || || || ||| | | ||| ||| | |||||||| || | || ||| Sbjct 19421499 ACGGCCTGGACAAGAATCTG-AAGGGAGAGCGCAATGTGCTTATTTTCGACCTGGGCGGT 19421441 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA---ATTTTTGAAGTTAAAGCA 349849 ||||||||||| || || | | || |||| |||||| | ||||| || | Sbjct 19421440 GGTACTTTTGACGTCTCCATCTTGACCATTGACGAGGGATCCCTGTTTGAGGTGCGCTCC 19421381 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909 ||||| || || || ||||| ||||| || || ||||| || || | ||| || ||| Sbjct 19421380 ACTGCGGGAGACACCCATCTGGGTGGCGAGGACTTTGACAACCGCTTGGTTAACCACTTT 19421321 Query 349910 GTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATCCTAGAGCAATGCG 349968 | | ||||||||||| |||| |||| ||| | | || || | ||| |||| Sbjct 19421320 GCCGAGGAATTTAAGCG-CAAGTACAAAAAGGATCTGCGCTCCAACCCACGCGCACTGCG 19421262 Query 349969 TCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTC 350028 |||||| | ||||| || || || ||||| || | || || | || | | || Sbjct 19421261 TCGCCTTCGCACTGCAGCCGAGCGCGCAAAGCGCACCCTTTCCTCCAGCACGGAGGCTTC 19421202 Query 350029 TATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCG 350088 | | || ||||| | || || || | || |||| || | | || || | Sbjct 19421201 TTTGGAGATTGACGCCCTGTACGAGGGACACGACTTCTACTCGAAGGTGAGCCGCGCCAG 19421142 Query 350089 GTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATT 350148 || || ||| | || || || || | ||| |||| || || || || | | | Sbjct 19421141 ATTCGAGGAACTTTGCGGTGACCTCTTCCGCAACACACTGGAGCCAGTTGAGAAGGCACT 19421082 Query 350149 AAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTAC 350208 ||||| || |||||| ||| | ||||| | || |||| || ||||| || ||||| Sbjct 19421081 CAAAGACGCCAAAATGGACAAGAGCCAGATCCACGACATAGTCTTGGTTGGAGGCTCTAC 19421022 Query 350209 ACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCT--TCT 350266 |||||||| || ||||| | | || | || || || | ||||| ||| || Sbjct 19421021 TCGTATTCCCAAGGTTCAGAACCTGCT-GCAGAACTTCTTCGGCGGAAAGACCCTGAACT 19420963 Query 350267 AGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTA 350326 | ||||| ||||| || || || || || || || || || | |||||| | ||| | Sbjct 19420962 TG-TCAATCAATCCGGACGAGGCGGTGGCCTACGGAGCAGCCATCCAGGCAGCCATTCTG 19420904 Query 350327 TCTGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCG 350386 || || | |||| | || | || | |||| | ||||| | ||||| ||| Sbjct 19420903 TCGGGCGACGAGAGCAGCGAGATCAAGGACGTTCTACTGGTCGATGTTGCCCCACTCTCG 19420844 Query 350387 CTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTA 350446 | || ||||||| | || | || ||||| || ||| | || || | Sbjct 19420843 TTGGGCATAGAAACCGCCGGCGGGGTGATGACCAAGCTGATTGAGCGCAACAGCCGCATT 19420784 Query 350447 CCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATT 350506 || || ||||| | || || | || | || || || ||||| ||||| || ||| Sbjct 19420783 CCGTGCAAGCAGTCCAAGACCTTCACCACCTACGCCGACAACCAGCCGGCGGTGACTATT 19420724 Query 350507 CAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACC 350566 ||||| ||||| || || | |||| ||||| || || ||| | | || ||| | | Sbjct 19420723 CAAGTGTTTGAGGGCGAGAGGGCTCTGACTAAGGACAACAATGTATTGGGCACATTCAAC 19420664 Query 350567 CTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATT 350626 || | || ||||| || || | ||||| || |||| || ||| |||| ||| | Sbjct 19420663 CTCACTGGCATTCCGCCCGCACCCCGTGGAGTGCCCAAGATCGACGTCACTTTTGATTTG 19420604 Query 350627 GATTCAAATGGTATTTTAAATGTTACCGC 350655 || |||| ||||| ||||||| ||||| Sbjct 19420603 GACGCAAACGGTATCCTAAATGTGACCGC 19420575 Score = 129 bits (142), Expect = 2e-24 Identities = 722/1139 (63%), Gaps = 30/1139 (3%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||||| ||||||||| | || || || || || || || | ||| | ||| ||| Sbjct 13323193 GCTATTGGAATCGATCTGGGCACCACCTACTCCTGCGTGGGTGTCTACCAACATGGCAAG 13323252 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || || || || || || || ||| | || ||||| || ||||| || || || Sbjct 13323253 GTGGAGATTATCGCCAACGACCAGGGCAACCGCACCACGCCGTCCTACGTGGCTTTCACA 13323312 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || | || || |||| || ||| | || || || || | || || || | ||| Sbjct 13323313 GATTCGGAACGCCTGATCGGCGATCCGGCCAAGAACCAGGTGGCCATGAACCCCAGAAAC 13323372 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACACA 349434 || || || || || |||||||| || || ||| | ||| | ||| || | Sbjct 13323373 ACAGTGTTCGACGCCAAGCGACTCATCGGCCGAAAATACGACGACCCCAAGATCG-CAGA 13323431 Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494 || | || || | ||||| | || || || ||||| | || || | || Sbjct 13323432 G---GACATTAAGCACTGGCCTTTCAAGGTGGT---AAGCGACGGCGGAAAGCCCAAGAT 13323485 Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554 | ||| || ||||| ||||| || |||| ||||||||||| |||||||| Sbjct 13323486 CGGGGTGGAGTATAAGGGTGAGTCCAAGAGATTTGCCCCCGAAGAAATCAGCTCAATGGT 13323545 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 | || || |||||||| | || || || ||| | || || | | || ||||| || Sbjct 13323546 GCTGGTCAAGATGAAGGAGACGGCGGAGGCGTATCTGGGAGAGAGCATCACAGATGCAGT 13323605 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 || || || |||||||| || || || ||||||| || || ||||| ||||| Sbjct 13323606 CATCACAGTTCCAGCCTACTTCAACGACTCCCAGCGCCAGGCTACCAAAGACGCTGGTCA 13323665 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 || || || | ||||| || | || || ||||| ||||| || |||||| | || || Sbjct 13323666 TATCGCCGGCCTGAATGTGCTCCGCATCATCAATGAGCCCACGGCGGCAGCACTGGCCTA 13323725 Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 || || || || | | || ||| | ||||| || || || || || || Sbjct 13323726 CGGACTGGACAAGAACCTCAAGGGTGAGCGCAATGTGCTTATCTTCGACTTGGGCGGCGG 13323785 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGG---AATTTTTGAAGTTAAAGCAAC 349851 || || ||||| || | || || | || ||||| | | || || || | || Sbjct 13323786 CACCTTCGATGTCTCCATCCTGACCATCGACGAGGGATCACTGTTCGAGGTGCGCTCCAC 13323845 Query 349852 TGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGT 349911 || || || ||||| | || || || || ||||| || || || ||| | || | | Sbjct 13323846 AGCCGGAGACACACACTTGGGCGGCGAGGACTTTGACAACCGGCTAGTTACCCACCTGGC 13323905 Query 349912 TAAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTC 349970 | || || ||||| |||| || | ||| | | || ||| | || | || | Sbjct 13323906 GGAGGAGTTCAAGCG-CAAGTACAAGAAGGATCTGCGCTCCAACCCTCGCGCCCTACGAC 13323964 Query 349971 GCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTA 350030 |||| ||||| || |||||| || |||||| | | || || | || | || | | Sbjct 13323965 GCCTCAGAACAGCAGCTGAACGGGCCAAGCGTACACTCTCCTCCAGCACGGAGGCCACCA 13324024 Query 350031 TTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTA--TTACACGTGCTCG 350088 | || || || | | ||| || | || ||| | || | | | | || || | Sbjct 13324025 TCGAGATCGACGCATTGTTTGAGGGTCAGGACTTC--TACACCAAAGTGAGCCGCGCCAG 13324082 Query 350089 GTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACA--ATGGATCCTGTGGAAAAAGTA 350146 |||||| || | || ||| || || |||||| || | |||||||| || | Sbjct 13324083 GTTTGAGGAGCTGTGCGCGGACCTCTT--CCGCAACACCCTGCAGCCTGTGGAGAAGGCC 13324140 Query 350147 TTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCT 350206 | || ||||| || ||| ||| |||||| | || | || | || || || || Sbjct 13324141 CTCAACGATGCTAAGATGGACAAGGGTCAGATCCACGACATCGTGCTCGTCGGCGGATCC 13324200 Query 350207 ACACGTATTCCAAAAGTTCAACAGT-TACTATCTGAGTTTTTTAATGGCAAAGAACCTTC 350265 || || ||||| || || ||| ||| | || ||||| || | ||| ||||||| || Sbjct 13324201 ACTCGCATTCCCAAGGTACAA-AGTCTGCTGCAGGAGTTCTTCCACGGC-AAGAACC-TC 13324257 Query 350266 TA--GATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTAT 350322 | ||| || || ||||| || || || ||||| || |||||||| ||||| |||| Sbjct 13324258 AACCTATCCATCAACCCAGACGAGGCAGTGGCATACGGAGCTGCTGTGCAGGCCGCTAT 13324316 Score = 84.2 bits (92), Expect = 7e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 235889 GGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAA 235948 ||||||||||| ||| ||||||| ||||||||| ||||| ||||||||| |||||| | Sbjct 7785189 GGGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACGGGGATCGAT 7785130 Query 235949 ACCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 7785129 GCCCCGCATCTCCA 7785116 >seq1 Length=23539531 Score = 178 bits (196), Expect = 4e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || || | || ||||| ||||| || ||||| ||||| ||||| Sbjct 10088943 ACCACCACGCAGGCGGAGCACCAAGTGCAGAGTGGACTCCTTCTGAATGTTATAGTCAGA 10088884 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || |||||||| || || || ||||| ||||| ||||| |||||||| ||||| Sbjct 10088883 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGG 10088824 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 |||||||||||| |||||||| || ||||| ||||| || || | ||| || ||||| || Sbjct 10088823 AATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCCGACGGTTCGAC 10088764 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | ||||| || || || || || || || |||||||| Sbjct 10088763 CTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCAT 10088716 Score = 131 bits (144), Expect = 5e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 ||||||||||| | | || || | || || || ||||| || || || || || || Sbjct 4075145 ATACCACCACGCAGGCGGAGCACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCG 4075086 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 || | || || ||||| || || || || || || ||||| ||||| |||||||| || Sbjct 4075085 GACAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGG 4075026 Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687 ||||| || || |||||||| || ||||| || ||||| || || | ||||| || || Sbjct 4075025 GGAATGCCCTCCTTATCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCAGAAGGCTCC 4074966 Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || | || | ||||| ||||| || ||||| || || |||||||| Sbjct 4074965 ACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATCTGCAT 4074916 >seq4 Length=24153973 Score = 159 bits (176), Expect = 1e-33 Identities = 701/1103 (64%), Gaps = 20/1103 (2%) Strand=Plus/Plus Query 349577 GCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTT 349636 || || || ||||| || | | || || ||||| || | || || || || || || Sbjct 13640415 GCGGAGGCCTATTTGGGCGGCTCGGTGACAGATGCGGTGGTCACCGTTCCGGCGTACTTC 13640474 Query 349637 AATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTA 349696 || || ||||||| || || || ||||| || ||||||||| || ||||| || Sbjct 13640475 AACGACTCCCAGCGCCAGGCCACCAAGGATGCGGGTGCCATTGCGGGATTGAATGTCCTT 13640534 Query 349697 AGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGAC 349756 | || || || ||||| || || || || || || || || | ||||| | | || Sbjct 13640535 CGCATTATCAACGAACCAACGGCGGCGGCCATAGCCTACGGCTTGGATAAGCAGGGC-AC 13640593 Query 349757 CAA-GaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACT 349815 || ||| |||| | || || || || | ||||||||||| || || ||||| | || Sbjct 13640594 CAGCGAACGAAATGTCCTGATCTTCGACCTTGGTGGTGGTACCTTCGACGTATCCGTGCT 13640653 Query 349816 AACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGG 349875 || | || || || || || || || || || || ||||| || || ||||| || || Sbjct 13640654 GACCATCGAGGATGGCATCTTCGAGGTGAAGGCCACCGCTGGCGACACCCATCTCGGCGG 13640713 Query 349876 AGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAA 349935 |||||| || ||||| || || || || || || | || ||| |||| || ||| Sbjct 13640714 AGAAGACTTCGATAACCGACTGGTAAACCACTTCGTACAGGAGTTTCAGCGCAAACATAA 13640773 Query 349936 AATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGC 349995 | ||| | || | || | || || | || || | || || || ||| | || Sbjct 13640774 GAAGGATCTGGGCCAGAACAAGCGTGCCTTGAGGCGACTCCGCACCGCCTGCGAAAGGGC 13640833 Query 349996 TAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGG 350055 ||||| | | || || | || || || || || || ||||| || ||| || Sbjct 13640834 AAAGCGCACGCTCTCCTCGTCCACGCAGGCCAGCATCGAGATCGATTCCCTCTTTGAGGG 13640893 Query 350056 CAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATG--GATCTT 350113 | || |||| | || | ||||| || || || ||||| | || ||| ||||| Sbjct 13640894 CGTCGACTTCTACACCTCGGTGACACGAGCCCGCTTCGAAGAGT--TGAATGGCGATCTG 13640951 Query 350114 TTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAAT 350173 || | | || ||||| || |||| || | | ||||| || ||| ||| Sbjct 13640952 TTCCGTGGTACCATGGAACCCGTGGCCAAGGCGCTGCGCGATGCCAAGATGGACAAGGGC 13641011 Query 350174 CAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTA 350233 ||||| | || | || | || ||||| || || | ||||| ||||| |||| | Sbjct 13641012 CAGATACACGACATCGTCCTTGTGGGTGGCTCCACCAGGATTCCCAAAGTGCAACGCCTG 13641071 Query 350234 CTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGA----TCAATTAATCCAGATGAAGC 350289 || || || || || ||||| || |||| | || |||||||| ||||| || Sbjct 13641072 CTGCAGGACTTCTTCAACGGCAAGGA----TCTAAACAAGTCCATTAATCCCGATGAGGC 13641127 Query 350290 TGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAAGAGTTCTAA--- 350346 || || ||||||||||| || ||||| | || | ||| || | || | Sbjct 13641128 GGTGGCCTATGGTGCTGCAGTGCAGGCTGCCATCCTCCATGGCGAT---ACATCGGAGGC 13641184 Query 350347 AATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAGAAACTTCTGG 350406 | | | ||||| | || || ||||| ||||| || || || || | || || |||| Sbjct 13641185 AGTGCAGGATCTGCTCCTGCTGGATGTCACTCCTCTGTCTCTGGGTATTGAGACCGCTGG 13641244 Query 350407 TGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAAAAGTCCCAAAC 350466 || ||| ||||| || ||| || || | || |||| || || | | |||| Sbjct 13641245 TGGAGTGATGACCACACTGATTAAGAGGAACACCACCATACCCACCAAGCAAACGCAAAT 13641304 Query 350467 TTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTTGAAGGTGAACG 350526 ||| | || | ||| || || ||||||| || || || || || || ||||| || Sbjct 13641305 CTTTACCACTTATGCGGACAACCAGCCAGGTGTGCTTATCCAGGTGTTCGAGGGTGAGCG 13641364 Query 350527 TGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGAAATTCCACCAAT 350586 || || ||||| || | || || | ||| || | ||||||||| Sbjct 13641365 GGCGATGACGCGGGATAACAACAGCCTGGGTAAGTTTGAACTCTCGGCAATTCCACCGGC 13641424 Query 350587 GCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAATGGTATTTTAAA 350646 || | ||||| || ||| | || || | || || || ||| | ||||| || | || Sbjct 13641425 TCCACGCGGAGTGCCCCAGGTGGAGGTGACCTTTGACATCGATGCCAATGGAATACTCAA 13641484 Query 350647 TGTTACCGCAGTTGAAAAATCAA 350669 ||| || ||| | ||||| |||| Sbjct 13641485 TGTGACGGCACTGGAAAAGTCAA 13641507 Score = 138 bits (152), Expect = 3e-27 Identities = 156/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| ||||| || ||||| || || || || ||||| || | || || || ||||| | Sbjct 3789621 CAAG-TGAAGGGTTGACTCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCGTCTTCCA 3789679 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 |||| || || || ||||| ||||| |||||||| || || ||||| || |||||||||| Sbjct 3789680 GTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATTCCCTCCTTATCCTGAA 3789739 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || || || ||||| ||||| | || ||||| ||||| || | || | ||||| | Sbjct 3789740 TCTTGGCCTTCACATTCTCAATGGTGTCCGATGGCTCAACCTCCAAAGTGATGGTCTTGC 3789799 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || || || || |||||||| Sbjct 3789800 CAGTGAGAGTCTTCACGAAGATCTGCAT 3789827 Score = 132 bits (146), Expect = 1e-25 Identities = 176/248 (71%), Gaps = 16/248 (6%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| || || | | ||||| | ||||| || ||||| || || || || ||||| Sbjct 3789825 CATACCTCCTCGCAGACGGAGAACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAATC 3789884 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTT----------------TCCAGCAAAGATTA 140610 || | || || || ||||| ||||| || ||| || ||||| | Sbjct 3789885 GGACAGGGTGCGTCCGTCTTCCAGTTGCTTGCCGGTGGATGAGGCTTCCGGCGAAGATCA 3789944 Query 140611 GACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAA 140670 |||| |||||||| || |||||||| || ||||||||||| ||||| || ||||| |||| Sbjct 3789945 GACGCTGCTGATCTGGGGGAATTCCCTCCTTATCCTGAATCTTAGCCTTAACATTCTCAA 3790004 Query 140671 TCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAA 140730 | | ||||| || || || || || || | ||||||||||| | || || ||||| | Sbjct 3790005 TGGTGTCAGACGGCTCTACCTCGAGGGTGATGGTCTTTCCGGTCAAGGTCTTCACAAAGA 3790064 Query 140731 TCTGCATT 140738 |||||||| Sbjct 3790065 TCTGCATT 3790072 >seq671 Length=216 Score = 149 bits (164), Expect = 2e-30 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | ||||| | ||||| || ||||| || || || || || || Sbjct 8 CATACCACCACGCAGACGGAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTC 67 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || ||||| || || || || || || ||||| ||||| |||||||| || Sbjct 68 AGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGG 127 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||||||| || || || || || ||||| || ||||| ||||| | || ||||| || Sbjct 128 AGGAATTCCCTCCTTGTCTTGGATCTTAGCCTTCACATTCTCAATGGTGTCTGATGGCTC 187 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGT 140713 |||||| || || | ||||||||||| Sbjct 188 AACTTCCAGGGTGATGGTCTTTCCGGT 214 >seq9 Length=20829647 Score = 118 bits (130), Expect = 3e-21 Identities = 246/365 (67%), Gaps = 5/365 (1%) Strand=Plus/Minus Query 349531 ACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTT 349590 |||||| || || || | |||||| | | || |||||||||| ||||| || ||| | Sbjct 11066542 ACCCGAGGAGATCTCCGCCATGGTTCTGGGCAAGATGAAGGAAACCGCTGAGGCCTATCT 11066483 Query 349591 AGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCG 349650 || | | || || |||| || |||| || |||||||| || || ||||||||||| Sbjct 11066482 GGGCAAGAAGGTCACCCATGCCGTCGTTACCGTGCCAGCCTACTTCAACGATGCCCAGCG 11066423 Query 349651 TTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGA 349710 | || || || |||||||| ||||| || | | || | | || || || || Sbjct 11066422 TCAGGCCACCAAGGATGCTGGTGTGATTGCCGGTCTGCAGGTGATGCGCATCATCAACGA 11066363 Query 349711 ACCCACTGCTGCAGCAATTGCATATGGGCTTGATAA-AATGAGTGACCAAGaaaaaaaTA 349769 |||||||||||| || ||||| || || || || || || ||| | || || || Sbjct 11066362 ACCCACTGCTGCGGCTATTGCCTACGGTCTGGACAAGAAGGAGGG----CGAGAAGAACG 11066307 Query 349770 TTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGG 349829 | ||| | || ||||| || || || || || ||||| || || || || | || | | Sbjct 11066306 TGCTTGTGTTCGATTTGGGCGGCGGCACCTTCGATGTCTCCCTGCTGACCATCGATAACG 11066247 Query 349830 GAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATA 349889 || | || || || || || |||||||| ||| | || || || || || ||| Sbjct 11066246 GAGTGTTCGAGGTGGTGGCCACCAACGGTGATACTCATTTGGGAGGTGAGGACTTCGATC 11066187 Query 349890 ATCGT 349894 | ||| Sbjct 11066186 AGCGT 11066182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515106483233057