Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20simulans_20[refseq_20GCF_5F000754195.2_202014-09-19]
7,619 sequences; 124,963,774 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq1 398 1e-105
>seq1
Length=23539531
Score = 398 bits (440), Expect = 1e-105
Identities = 1210/1856 (65%), Gaps = 24/1856 (1%)
Strand=Plus/Plus
Query 76770 TTCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATA 76829
||||| | || || |||||||| | | | || || || || || |||||||||||
Sbjct 10003394 TTCTTGTTCACGGTGAACTGAATGGCATTCGCAGCTGGCTTGGTGCGCAGATAGTACATT 10003453
Query 76830 CCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTA 76889
|| ||||| ||||| |||| ||| || || ||| ||||| || ||| |
Sbjct 10003454 CCGGTTTTAAGACCTGCTTTCCAGGAGTAAAAGTGTATGGAAGTCAGCTTTCCATAGTTT 10003513
Query 76890 GGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCC 76949
|| ||||| | ||| || || | ||||||||| ||||| ||||| || || | ||| ||
Sbjct 10003514 GGCTCGGCCACATGTATGTTGAACGACTGACTCTGATCTATGAACGCACCACGATCGGCG 10003573
Query 76950 GCCATTTTTATAATGGTCTTT--TGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGA 77007
|||||||| || ||| ||| |||| |||||||| | || ||| | | | | |
Sbjct 10003574 GCCATTTTAATCGTGGACTTGACTGAG--ATTTCCCACACCGTCTTGTACAGATCTCGCA 10003631
Query 77008 TATCATCTGG---AAGGTTTGTAT--TTTGAATGGAACCACCATCT-GATATAATTGTAT 77061
| ||||| | ||| | || ||||||| || || || || ||||| || |
Sbjct 10003632 CCT--TCTGGGGTATGGTCTCAATGTTTTGAATCGATCC-CCTGCTCGATATGATCTGGT 10003688
Query 77062 TCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAA 77121
|||| || || || | |||||| | | || |||| | | | | |||| | || |
Sbjct 10003689 TCTTCATGTCGTCGTCCCACAAGTCCAGTTCGGTTAGGTCGCGCAACAAATGATGGTTGA 10003748
Query 77122 CTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCA 77181
| | || ||||| || |||| |||| || ||||| || || |||| || || || |
Sbjct 10003749 CCACCTGGAATTCGCCGGACAGAACTCGCCGGGTGTATATGTTCGTGGTGTACGGCTCGA 10003808
Query 77182 CAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATA 77241
||||||||||| |||| || ||||| ||||| ||||| ||||| || || || | |
Sbjct 10003809 AGGATTCATTGTTGCCCATTATCTGAGCTGTAGATGCAGTGGGCATGGGAGCAACGAGCA 10003868
Query 77242 AACTATTTCTGAGACCATGTGTTCTGATTTTA-TCTTTTAGATATTTCCAATCCCAAAGA 77300
|| | || ||| || |||| | | | || || | | | ||| ||||| ||
Sbjct 10003869 GTGAGTTCCGGACACCGTGC-TTCTTAATGGACTCCTTCAATTTCTGCCAGTCCCACAGG 10003927
Query 77301 TCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCA 77360
| | || || ||||| | ||||| || | |||||| || || | ||
Sbjct 10003928 TTCGTTGGCACCTTGTCCCACATGTCGTACTGCAAAATTCCTTTGCTCACCGGGCTGCCC 10003987
Query 77361 TTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCG 77420
| || ||||| || || ||||| || | || ||||| || || |||||||| || ||
Sbjct 10003988 TCGTAGGTTTCGTATGGACCTTCGGTCTGGGCCAGTTCGCAGCTGGCTTCCAAGGCGCCA 10004047
Query 77421 TAATAAATTGTTTCGAAAATCTTCTTATT---GAGATCTTGTGCTTCAATACTATCAAAC 77477
|| ||||| ||||| || |||| || ||| |||| | | |||| || || ||
Sbjct 10004048 TAGTAAATCGTTTCAAATATCTGCTGATTCAAGAGACCGGCTTCTTCG---CTTTCGTAC 10004104
Query 77478 GGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTA 77537
|| || | | ||||| |||||||| || |||||||||| ||||| || | || | |
Sbjct 10004105 GGGAAACGCATGAGAATCAAGGCATCAGCGAATCCCTGAATACCAATGCCCACGGGACGA 10004164
Query 77538 TGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTA 77597
|| ||| |||||| | | || ||||| | ||||||||||| || || || || ||
Sbjct 10004165 TGCCTCAAATTGGACTTCCTTGCCTCTGGCAGCGGATAATAATTGATATCAATTATCTTG 10004224
Query 77598 TTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAA--TCTTC 77655
|| |||||| | ||||| || || ||||| || || |||||| | |||||
Sbjct 10004225 TTTAGATTTTTGGTAACTATCTTTGTGACTTCCTTGAGCTTCTTGAAATCATACGTCTTC 10004284
Query 77656 -CATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTA 77714
| | || |||||||| | || || || || | || || ||||| | |||||
Sbjct 10004285 TCCGGCGTGACGAACATGTTGAGGGCGATGGAGGCCAAGTTGCAGACTGCAATCTCATCC 10004344
Query 77715 GCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTT 77774
| || ||||| | || || || || | || || || || || ||||| | |||
Sbjct 10004345 GGTGAGGAATATTCAACGATTTCCGTGCACAAGTTGCTGCACTTAATGGTGCCTACATTC 10004404
Query 77775 TGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCA 77834
|| ||||||||||| | ||||| | |||||| | || || ||||| | ||||| ||
Sbjct 10004405 TGCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGAAGAGCATGTACGGATTTCCGGTCTCC 10004464
Query 77835 ATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTTGTATCGC 77894
| || | || || || | ||| | | | ||| || | | | ||| ||
Sbjct 10004465 ACTTGCGCCTCAATGATGGCAAACCACAGGGATTGAGCCTTAACCGTTCGGTTGGCCCGA 10004524
Query 77895 CTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAAT 77954
| |||| || |||| || ||| ||| |||||||| ||||| || || | |
Sbjct 10004525 CCCTCTTGCTCGTATTTCTCGTACAGCTTTTCGAATTCATCGCCCCACACTTCGTGGAGA 10004584
Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014
|| || || | | |||||||| | ||||| ||||| | ||| || ||||||||
Sbjct 10004585 CCTGGACACTTGTGGGGGCACATGAGCGACCAATCACCGTTGGCCTCCACGCGTTTCATG 10004644
Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074
|||||||| |||||||| || || ||| ||||| || | | || ||||| || ||
Sbjct 10004645 AAGAGATCGGGTATCCACAGGGCGTAAAACAGATCGCGTGCGCGATTCTCTTCTTTGCCC 10004704
Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134
|| ||||| || || || || ||||| | | ||| || ||||| ||||| ||||| ||
Sbjct 10004705 GTGTTCTTCTTCAGTTCCAGGAACTCAAAGACATCCGAGTGCCAGGGTTCCAGATAAATG 10004764
Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194
|| | | || || || || ||||||||||| | ||| | || |||||| |
Sbjct 10004765 GCAAAGGCACCGGGGCGCTTGCCGCCTCCCTGATCCACATAACGAGCCACATTATTAAAG 10004824
Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254
|| |||| ||| |||| | || || || || |||||||| || |||| | | ||
Sbjct 10004825 ACCCTCAGCATGGGAACCAACCCATTGGAAGTACCATTTGTGCCGCAAATCGAGGTGCCC 10004884
Query 78255 CTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCG 78314
|||| ||||| | | | | || || || || || ||| || || | |||
Sbjct 10004885 TTTGCACGAATGCAATGCACGTTGAGTCCGATGCCACCGGCGGACTTGGAGATCATGGCG 10004944
Query 78315 CAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAA 78374
|| ||| || | | | | || ||||| || ||| || ||||| | ||||| |||
Sbjct 10004945 CATTGTTCCACAGACTTGAAAATGCCCTCGATGGAGTCGGCCGTCATGGTCAGAAGGAAA 10005004
Query 78375 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTA 78434
|| |||| || | | || | || ||| | ||| || |||||||| ||
Sbjct 10005005 CACGACGACAACTGCGGCCGGTTTGTGGCAGCGGCAAACAGTGTGGGCGATGCATGTGTG 10005064
Query 78435 AACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGA 78494
|| | || || || ||||| || ||||| | |||| || || ||| | |||
Sbjct 10005065 AAGTAGCGCTCCGACAGAAGATTATAGGTTTCCACGGCTGCATCGATATCCTCTCCATGG 10005124
Query 78495 ATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATT 78554
||||| | ||| || ||||||| ||||||||| |||| || | |||| ||| |
Sbjct 10005125 ATTCCGATCGCCACGCGCATCAGCATATGCTGCGGTCGCTCTGCGATCTTTCCGTTTCTC 10005184
Query 78555 TTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 78610
|| | || || || |||| || || || ||||||||||| || ||||||
Sbjct 10005185 TTGAGCAGATAGGAACGCTCCAGGGTCTTGAAGCCAAAATAGTTATACCCAAAGTC 10005240
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694602641480160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |