Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20simulans_20[refseq_20GCF_5F000754195.2_202014-09-19] 7,619 sequences; 124,963,774 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq4 84.2 2e-11 >seq4 Length=24153973 Score = 84.2 bits (92), Expect = 2e-11 Identities = 101/134 (75%), Gaps = 4/134 (3%) Strand=Plus/Plus Query 107558 GTTGCCCAAATCGCCGACGTGACGCTCCGCGGCGTCGGGCGCGCCATGCTGCTGATGCG- 107616 |||||||| |||||| | |||||| | | || || |||| ||||| |||| || ||| Sbjct 10847974 GTTGCCCAGATCGCCCAGGTGACGGTTCTCGTCGACGGGAGCGCCGTGCTCCT--TGCCA 10848031 Query 107617 TA-GGATTAAAGTGTTCGCCTGCCGACGTGCACCCATTGCTTGTGTCGCCAAATTCGTGC 107675 || || || ||||| || | |||| |||| |||||| | |||| ||||| |||||| Sbjct 10848032 TACGGGTTGAAGTGCGGTCCGGACGACATGCAGCCATTGGTGTTGTCTCCAAACTCGTGC 10848091 Query 107676 ACGTGAAAACCGTG 107689 ||||| || ||||| Sbjct 10848092 ACGTGGAATCCGTG 10848105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421772032061944