Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq6924 95.1 3e-14
seq7574 93.3 9e-14
seq6416 91.5 3e-13
seq3976 89.7 1e-12
seq4563 84.2 5e-11
>seq6924
Length=403623
Score = 95.1 bits (104), Expect = 3e-14
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand=Plus/Plus
Query 165704 ACGC-TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGG 165762
|||| ||||||| ||||||||||||||||||| ||||| ||||||| |||||||||
Sbjct 308897 ACGCATTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGG 308956
Query 165763 TTCGAGCCCCACGATGGGC 165781
||||||||||||| |||||
Sbjct 308957 TTCGAGCCCCACGTTGGGC 308975
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 308344 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 308285
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 308284 CCCCACGTTGGGC 308272
>seq7574
Length=3157482
Score = 93.3 bits (102), Expect = 9e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767
||||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||
Sbjct 129118 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 129177
Query 165768 GCCCCACGATGGGC 165781
|||||||| |||||
Sbjct 129178 GCCCCACGTTGGGC 129191
Score = 93.3 bits (102), Expect = 9e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767
||||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||
Sbjct 131778 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 131837
Query 165768 GCCCCACGATGGGC 165781
|||||||| |||||
Sbjct 131838 GCCCCACGTTGGGC 131851
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 95926 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 95867
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 95866 CCCCACGTTGGGC 95854
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 869071 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 869130
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 869131 CCCCACGTTGGGC 869143
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 141373 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 141314
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 141313 CCCACGTTGGGC 141302
>seq6416
Length=4379031
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 1865561 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1865502
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 1865501 CCCCACGTTGGGC 1865489
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 1866444 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1866385
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 1866384 CCCCACGTTGGGC 1866372
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 1866936 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1866877
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 1866876 CCCCACGTTGGGC 1866864
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 1868217 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1868158
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 1868157 CCCCACGTTGGGC 1868145
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 1869196 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1869137
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 1869136 CCCCACGTTGGGC 1869124
>seq3976
Length=747349
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 543181 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 543122
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 543121 CCCACGTTGGGC 543110
>seq4563
Length=14502029
Score = 84.2 bits (92), Expect = 5e-11
Identities = 118/163 (72%), Gaps = 6/163 (4%)
Strand=Plus/Plus
Query 230445 CCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504
||| || ||||||||| || |||||| |||||||| |||||||| || ||||| |
Sbjct 3739707 CCTCATCGGCATGAACTGCGATCTTATGTCGCAGTACATTGAATTCGTGGCGGACCG-AC 3739765
Query 230505 TTTTGTTGCACTTG---GTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTAT 230561
| || || | ||| ||| | ||| | ||||| | |||||||||||| || ||
Sbjct 3739766 TGCTGGTGGAGTTGAGCGTT--GGCAAAATCTACAATACCAAGAACCCCTTTAACTTCAT 3739823
Query 230562 GGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAG 230604
|||| | || ||||| | || ||||| |||||||| || |||
Sbjct 3739824 GGAGATGATCTCGCTGGACGGAAAGACGAACTTCTTTGAGAAG 3739866
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057706356748400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |