Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq4563 127 2e-24
>seq4563
Length=14502029
Score = 127 bits (140), Expect = 2e-24
Identities = 359/547 (66%), Gaps = 6/547 (1%)
Strand=Plus/Minus
Query 16955 AACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014
|||||||| || || |||||||| || |||||||| | | |||||| ||||| ||
Sbjct 3739604 AACATCAGCACGGCAAAGTCGCAATGCAAGCCCTCGTCGCGGGAGATAAGCTCGTTGGAG 3739545
Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074
|| |||| || |||||| || || ||||| | ||| || || | ||| || ||
Sbjct 3739544 AAGGTCAGTCCCGGCATCAGACCGCGCTTCTTCAGCCAGAAAATGGAGGCAAAGCTGCCG 3739485
Query 17075 GAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCT 17134
||||| || |||||||||| || || || || | || || || | | || |
Sbjct 3739484 CTGAAGAAGATGCCCTCGACGGCAGCGAAGGCAATGATGCGCTCCCCGAAATTGGCCGAT 3739425
Query 17135 TTGTTACGA-ATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATC--CATCGTT 17191
||| | || ||||| | |||| || || || |||| | || | ||| ||
Sbjct 3739424 TTGG-AGGAGATCCAGGAAAGGGCCCAGTCCGCCTTGCGCTTCA--CAGCCGGCATTGTC 3739368
Query 17192 TCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGT 17251
|| ||||| || || | | || | || | || || || || ||||| ||
Sbjct 3739367 TCGATGGCGTTGAACAGGTAGTCCCGCTGATGCGGATCCCGGATGTAAGTGTCGATCAGC 3739308
Query 17252 AGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGG 17311
| ||||||||||| ||||| | |||||||||||| || || || || || ||||| ||
Sbjct 3739307 ACACTGTACATTTCCGAGTGCACGTTCTCCATGGCGATTTGGAAGCCATAGAAGCACCGA 3739248
Query 17312 GCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCG 17371
|| |||| || || || ||| ||| || ||| | || || ||||||||||||||
Sbjct 3739247 GCCTCCGTGATCTGCACCTCCTGACTGAAGCGCTCCACCAGGTTCTCGTTCACGATGCCA 3739188
Query 17372 TCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGA 17431
||| ||||| || || |||| | ||| ||||| | |||||| | ||
Sbjct 3739187 TCGGATGCGGCAAAGAAGGCCAGCACGTGCGAGATGAAGTGACGTTCGTCGTCCTTCAGG 3739128
Query 17432 ACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCC 17491
| ||||||| | | || ||||| | |||||| || || |||||| ||| |||
Sbjct 3739127 CGGTGCCAGTCGGTCAGGTCCTTGGACAGATCCACCTCCTCCACGGTCCAGAAAGAGGCC 3739068
Query 17492 ACTGCCT 17498
| ||||
Sbjct 3739067 TCAGCCT 3739061
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517489446302400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |