Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq4563 132 5e-26 >seq4563 Length=14502029 Score = 132 bits (146), Expect = 5e-26 Identities = 309/459 (67%), Gaps = 8/459 (2%) Strand=Plus/Minus Query 16193 AACATTAGACACG-CGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGA 16251 ||||| || |||| | ||||||||||| | || ||||| | | |||||| |||||||| Sbjct 3739604 AACATCAG-CACGGCAAAGTCGCAATGCAAGCCCTCGTCGCGGGAGATAAGCTCGTTGGA 3739546 Query 16252 AAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAA--TGAC 16309 || || | || ||||| || || ||||| | |||||| || | ||||| || | Sbjct 3739545 GAAGGTCAGTCCCGGCATCAGACCGCGCTTCTTCAGCCAGAAAATGGAGGCAAAGCTGCC 3739486 Query 16310 CCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCA 16369 | ||| ||| || ||||| || | || || || || | || ||| || | | || Sbjct 3739485 GCTGAA--GAAGATGCCCTCGACGGCAGCGAAGGCAATGATGCGCTCCCCGAAATTGGCC 3739428 Query 16370 TCTTTATTACGA-ATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGT 16428 ||| | || ||||| | |||| || || || | || | | ||| || Sbjct 3739427 GATTTGG-AGGAGATCCAGGAAAGGGCCCAGTCCGCCTTGCGCTTCACAGCCGGCATTGT 3739369 Query 16429 TTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAG 16488 || ||||| || |||| | || | || ||| || || || || ||||| Sbjct 3739368 CTCGATGGCGTTGAACAGGTAGTCCCGCTGATGCGGATCCCGGATGTAAGTGTCGATCAG 3739309 Query 16489 TAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCG 16548 | |||||||||||| ||||| | |||||| ||||| || || || ||||||||||| || Sbjct 3739308 CACACTGTACATTTCCGAGTGCACGTTCTCCATGGCGATTTGGAAGCCATAGAAGCACCG 3739249 Query 16549 AGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACC 16608 |||||||| || || || ||| || || ||| |||||||||| |||||||| || Sbjct 3739248 AGCCTCCGTGATCTGCACCTCCTGACTGAAGCGCTCCACCAGGTTCTCGTTCACGATGCC 3739189 Query 16609 GTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAA 16647 || ||| ||||| || |||| | |||| ||||| Sbjct 3739188 ATCGGATGCGGCAAAGAAGGCCAGCACGTGCGAGATGAA 3739150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511358911537600