Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq1 131 1e-25 seq3325 123 2e-23 seq4812 104 2e-17 seq2 95.1 1e-14 >seq1 Length=22559587 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | |||||||| || | || |||||||| || ||||| ||||| | | Sbjct 1136945 CCACCGCGCAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 1137004 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| || ||||||||||||| ||||| || | || || | |||||| || ||| Sbjct 1137005 AGGGTTCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGG 1137064 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| ||||| | ||| || || |||||| Sbjct 1137065 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCCGAAGGCTCCACC 1137124 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| |||||||||||||| | ||||| || || |||||||| Sbjct 1137125 TCCAAGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 1137171 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||||| ||||||||||||||||| |||||||||||||| | Sbjct 20155547 CCACCACGCAGGCGCAGCACCAAGTGCAAAGTGGACTCCTTCTGAATGTTATAGTCAGAG 20155488 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | || |||||||| ||||| || | || || | |||||| || || Sbjct 20155487 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGA 20155428 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||| ||||| ||||| ||| || | ||| |||||| || || Sbjct 20155427 ATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCCGAAGGTTCGACC 20155368 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 || | || ||||||||||| || | || || || || || ||||| ||| Sbjct 20155367 TCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATCTTG 20155317 >seq3325 Length=21082 Score = 123 bits (136), Expect = 2e-23 Identities = 169/236 (72%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || ||||| | ||| |||| || | || |||||||| || ||||| ||||| | Sbjct 19615 TTCCACCGCGCAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGG 19556 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 |||||| | |||||||||| |||||||| || | ||||| | |||||| || || Sbjct 19555 ACAGGGTGCGTCCGTCCTCCAGTTGTTTGCCGGCGAAGATAAGACGCTGCTGATCTGGGG 19496 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||| ||||| || ||| || ||||| | | | ||||| ||||||| Sbjct 19495 GGATGCCCTCCTTATCCTGGATTTTGGCCTTCACATTCTCAATCGTATCGGAGGGCTCCA 19436 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGAAT 21182 |||| ||||||||||| || || || || || ||||| || ||||||||| || Sbjct 19435 CCTCCAAAGTAATGGTCTTTCCAGTCAAGGTCTTCACAAAGATCTGCATTTTGGAT 19380 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||| |||| ||||||||| || ||||| || ||||| || || | | Sbjct 20753 CCACCACGCAGACGGAGAACCAAATGCAAAGTCGATTCCTTCTGGATGTTGTAATCGGAC 20694 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | |||||||||| |||||||| || | || | || |||||| || ||| Sbjct 20693 AGGGTGCGTCCGTCCTCCAGTTGTTTGCCGGCGAAGATCAATCGCTGCTGATCTGGGGGG 20634 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| ||||| | | | || || ||||| | Sbjct 20633 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTTTCAATGGTGTCTGATGGCTCAACT 20574 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 |||| ||| ||||||||||| || | || |||||||| || |||||| Sbjct 20573 TCCAAGGTGATGGTCTTGCCAGTAAGTGTCTTGACAAAGATCTGCATT 20526 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||| |||| ||||| || |||||||| |||||||| || || | | Sbjct 20297 CCACCACGCAGACGGAGAACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAATCGGAC 20238 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | ||||| ||||| || || || | || || | |||||| || ||| Sbjct 20237 AGGGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCTGGGGGG 20178 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || || | | | || || || ||| Sbjct 20177 ATGCCCTCCTTGTCTTGGATCTTAGCCTTGACGTTTTCAATGGTGTCCGAAGGTTCCACC 20118 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 |||| ||| ||||||||||| || | ||||||||||| || |||||| Sbjct 20117 TCCAGGGTGATGGTCTTGCCAGTAAGAGTTTTGACAAAGATCTGCATT 20070 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || || | ||||||| || | ||||||||||| || ||||| || || | Sbjct 19843 TTCCACCGCGTAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAG 19784 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 || || | | ||||||||||| || || || |||| || | |||||| || || Sbjct 19783 ACAAAGTGCGACCATCCTCCAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCTGGGG 19724 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | || |||||||| |||||| ||||| | ||| |||||| ||||| Sbjct 19723 GGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTATCAGAAGGCTCAA 19664 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 ||| | || ||||| |||||||| || || |||||||| || |||||| Sbjct 19663 CTTCAAGAGTGATGGTTTTGCCGGTCAAAGTCTTGACAAAGATCTGCATT 19614 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || || | ||||||| || | ||||||||||| || ||||| || || | Sbjct 20071 TTCCACCGCGTAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAG 20012 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 || || | | ||||||||||| || || || |||| || | |||||| || || Sbjct 20011 ACAAAGTGCGACCATCCTCCAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCTGGGG 19952 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | || |||||||| |||||| ||||| | ||| |||||| ||||| Sbjct 19951 GGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTATCAGAAGGCTCAA 19892 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 ||| | || ||||| |||||||| || || |||||||| || |||||| Sbjct 19891 CTTCAAGAGTGATGGTTTTGCCGGTCAAAGTCTTGACAAAGATCTGCATT 19842 >seq4812 Length=908733 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| ||||| | |||||| | |||||||||| || ||||| Sbjct 619861 GTCGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCGTCCTCCAGTTGCTTGCCG 619920 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | ||||||||| ||| | || |||||||| |||||| || Sbjct 619921 GCGAAGATGAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTG 619980 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | |||||| ||||| ||||| ||||||||||| ||||| || || Sbjct 619981 ACGTTTTCAATGGTATCAGAAGGCTCGACTTCCAGAGTAATGGTCTTTCCGGTCAAAGTC 620040 Query 21159 TTGACAAATATTTGCAT 21175 || || || |||||||| Sbjct 620041 TTCACGAAGATTTGCAT 620057 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||| |||| |||||| || |||||||| |||||||| || || | | Sbjct 620059 CCACCACGCAGACGGAGAACCAAATGCAAGGTCGACTCCTTCTGAATGTTGTAATCGGAC 620118 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || | | ||||| ||||| || || || | || || | |||||| || ||| Sbjct 620119 AAAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCTGGGGGA 620178 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| ||| || | | | || || |||||| Sbjct 620179 ATACCCTCCTTGTCTTGGATCTTGGCTTTGACGTTTTCAATGGTGTCTGAAGGCTCCACC 620238 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 |||| ||| ||||||||||| || | |||||||| || || |||||| Sbjct 620239 TCCAGGGTGATGGTCTTGCCAGTAAGAGTTTTGACGAAGATCTGCATT 620286 Score = 98.7 bits (108), Expect = 8e-16 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || ||||| | ||| |||| || | || |||||||| || ||||| ||||| | Sbjct 620285 TTCCACCGCGCAGACGGAGTACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGG 620344 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 |||||| | |||||||||| |||||||| || | ||||| | |||||| || || Sbjct 620345 ACAGGGTGCGTCCGTCCTCCAGTTGTTTGCCGGCGAAGATAAGACGCTGCTGATCTGGGG 620404 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | || |||||||| |||||| || || | | | || || |||||| Sbjct 620405 GAATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTTTTCAATGGTGTCCGAAGGCTCCA 620464 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTT 21160 |||| ||| ||||||||||| || | ||||| Sbjct 620465 CCTCCAGGGTGATGGTCTTGCCAGTAAGAGTTTT 620498 >seq2 Length=2985096 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | || |||| ||||||||| |||||||| || || || ||||| | | Sbjct 124193 CCACCACGCAGACGCAGGACCAAATGCAAAGTAGACTCCTTCTGGATATTGTAGTCGGAC 124134 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || | ||||||||| ||| || || || | || | | ||||||||| ||| Sbjct 124133 AAAGTGCGTCCGTCCTCCAACTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCTGGGGGA 124074 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| ||||| | ||| ||||| ||||| Sbjct 124073 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTATCGGAAGGCTCAACC 124014 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || ||||||||||| || | || || || || || ||||| Sbjct 124013 TCCAAAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 123967 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||||| || | ||||||||||| || ||||| ||||| | || || | | ||| Sbjct 123950 AGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGTCCATCC 123891 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||| ||| || || || | || || | ||||||||| ||| | ||| |||||||| Sbjct 123890 TCCAACTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 123831 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| || || | ||| ||||| ||||| |||| || |||||| Sbjct 123830 TGGATCTTGGCCTTAACATTCTCGATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTC 123771 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 ||||| || | ||||| || || |||||||| ||| Sbjct 123770 TTGCCAGTCAGGGTTTTCACGAAAATTTGCATGTTG 123735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422214530254880