Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq1 158 1e-33
seq3325 156 4e-33
seq4812 152 4e-32
seq2 136 3e-27
seq5016 98.7 9e-16
>seq1
Length=22559587
Score = 158 bits (174), Expect = 1e-33
Identities = 912/1446 (63%), Gaps = 53/1446 (4%)
Strand=Plus/Plus
Query 132903 GCGGCGGGTTTTGTGCGCAAATAATACATGCCCGTTTTCAGTTTTTTCTCCCACGCGTAA 132962
|| || || |||||||||| |||||||| || ||||| || | ||| | |||
Sbjct 20041612 GCAGCTGGCTTTGTGCGCAGGTAATACATTCCAGTTTTTAGACCAGCTTTCCAGGAATAA 20041671
Query 132963 AAGTGTATGCTCGACACCACCGAGTAAGTGGGTTCGGCGACAAATAAATTCAGCGATTGA 133022
||||||||| | | ||| | || || || ||| | || | ||| |||
Sbjct 20041672 AAGTGTATGGAAGTAAGTTTTCCGTAGTTTGGCTCTGCCACATGAATGTTGAACGACTGA 20041731
Query 133023 CTCTGATCTATGAAAGGAGCACGGTCGGCGGCCATGTTTATTATACACTTTGATTTGATC 133082
||||||||||| || | | | || || |||||||| || || | ||||| | |||
Sbjct 20041732 CTCTGATCTATAAACGCACCTCGATCTGCGGCCATCTTAATAGTGGACTTTACTGAGATT 20041791
Query 133083 TCCCATGCCGTCTTGAAGAGATTCTTGACATGCTGTGGTATTTCGTCAATGTTCTGCACG 133142
||||| | || ||| | |||| || | ||| || || | ||||| || || |
Sbjct 20041792 TCCCACACAGTTTTGTACAGATCGCGAACCTTCTGGGGGATGGCCTCAATATTTTGGATT 20041851
Query 133143 GACCCGTTTTCGGCCAAAATCTTGTTGCGCAATTCCGGAGTGTAA-ATGTCGAGATCGAT 133201
|| || | || | || | ||| || || | || | | ||| || || |
Sbjct 20041852 GAGCCCCTGCTGGAAATGATTTGGTTCTTCATATC-GTCGTCCCACAAGTCCAGCTCCGT 20041910
Query 133202 TAGCGCTTTGACGAGATACTGGTTGACCACTTGAAACTCGCCGGCGAGAACGCGTCTGAG 133261
||| | | | | || ||||| |||||||| || || || | ||||| || |||
Sbjct 20041911 TAGGTCCCTTAACAAATGATGGTTAACCACTTGGAATTCTCCAGACAGAACTCGCCTGGT 20041970
Query 133262 ATATACATTCGACGTGAACGGTTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGT 133321
||| | ||||| ||| | || ||||| ||||||||||| || | || || || || |
Sbjct 20041971 ATAAATATTCGTTGTGTAAGGCTCGAATGATTCGTTGTTACCCATAATTTGAGCAGTAGA 20042030
Query 133322 CGCCGTGGGCATGTACGCCACCAACAAAGAGTTTCTTACGCCGTACTTGTTTATGTTGCA 133381
|| |||||||| || ||||||| ||||| | || |||| ||| || |||
Sbjct 20042031 AGCAGTGGGCATAGGAGCAACCAACAGGGAGTTCCGGACACCGTGCTTCTTGATGGACTC 20042090
Query 133382 CTGCAATTCGTTCCAGTCCCACAGATT-GTTGGAATGATAGACGCCGTTCTCGTCGTCGT 133440
|| || || | ||||||||| || || ||||| ||| | |||
Sbjct 20042091 CTTCAGTTTCTGCCAGTCCCAAAGGTTCGTTGG----------------CTCTTTGTCCC 20042134
Query 133441 AGTTGTGAAAATGCAAAATACCCCTGCTCACCGGACTGTCCGTGTACGATTCATAGGGTC 133500
| ||| | |||| ||| || ||||||| || || || || | |||||| || |
Sbjct 20042135 ACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCATAGGTTTCATATGGAC 20042194
Query 133501 CGTTGATTTTGGCCAGCTCGCAGCTAGCCTCCAAAGCGGCAAAGTAAATGGTTTCCGCGA 133560
| | ||| | |||||| || || || || ||||||||| | |||| || ||||| |
Sbjct 20042195 CTTCGATCTGGGCCAGTTCACAACTGGCTTCCAAAGCGCCGTAGTAGATAGTTTCGAAAA 20042254
Query 133561 TTGAATAGTTGACGAACCTGGCATCGTCGCTATCGTAGGCGATGTCGAGAAGAACAAACG 133620
| | || | || | ||| || || || || |||| || | |||| || |
Sbjct 20042255 TCTGCTGATTCAAGAGGCCGGCTTCATCACTTTCATAGGGGAACCGCATGAGAATCAAGG 20042314
Query 133621 CGTCGGCCAAACCCTGTATGCCGACGCCGATGGGTCGATGTTTTTTATTGCTCCTCTCCG 133680
|||| || || ||||| | |||| ||| | ||| ||||| | |||| ||| |
Sbjct 20042315 CGTCAGCGAATCCCTGGACACCGATGCCCACGGGACGATGCCTCAAATTGGATTTCTTGG 20042374
Query 133681 ACTCGGCCGTGGGATAGTGGTTGACGTCGATGATCTTGTTGAGATTGCGGACGATAATTT 133740
||| | | ||| ||| ||| | ||||| |||||||| ||||| | | | |
Sbjct 20042375 CCTCTGGCAGGGGGTAGAAGTTAATATCGATTATCTTGTTAAGATTCTTGGTAACCGTCT 20042434
Query 133741 TAGTCAAATGTTTCAG---CAAAACATAGTCAAATGTCTTGGCGTCGACGTCGACGCACT 133797
| || | | || || | | || || ||||||| || || || ||| ||
Sbjct 20042435 TGGTAACTTCCTTAAGTTTCTTGAAATCGT---ATGTCTTCTCGG-GA-GT-GACAAACA 20042488
Query 133798 TGTTGACGGCAATACTGGCTAGATTACAAACGGCCGTCTCGTTCTCGTCGCAATACTGGA 133857
|||||| ||| || || | || ||||| || |||| | | || |||||| |
Sbjct 20042489 TGTTGAGGGCGATGGATGCCAAGTTGCAAACTGCAATCTCATCCGGAGCGGAATACTCTA 20042548
Query 133858 CGATCTCGGCGCAGAGGTTGCTGCATTTGATGGTGCCCAAAtttttttGATTGCTAAAGT 133917
|||| || | ||| | ||||| || ||||||||||| | ||| | || |||||
Sbjct 20042549 CGATTTCTGTGCACAAATTGCTACACTTGATGGTGCCGACATTCTGCTGGTTGCTCTTCC 20042608
Query 133918 TATTGCAATGATCCTTGTATAGCATGTACGGCCCGCCGGTTTCGACGTTGGTCTCGACGA 133977
| ||||| |||||| | | |||||| || || |||||||| | | || | |
Sbjct 20042609 TGTTGCAGGCATCCTTAAACAACATGTAGGGGTTTCCAGTTTCGACCTGTGCTTCAATAA 20042668
Query 133978 T---AAATCTAAACAAGTCTCTCGCCTTCACCTGCCT-TTCGTACA-----CTTGAGCAT 134028
| ||| | ||| | | ||||| || || || | || |||| |||
Sbjct 20042669 TGGCAAACC---ACAGGGATTGAGCCTTAACAGTTCTGTTGGCACGACCCTCTTGCTCAT 20042725
Query 134029 TTTCGTAGTCGCAATATCTCATTTCGAAATCAAAACCGTATTTGTCGGCGAGGTCAGGGC 134088
|| || || || | ||||||| ||| || | ||| || ||||||
Sbjct 20042726 ATT-----TCTCA-TACAACTTTTCGAATTCATCGCCCCACACATCGTGAAGCCCAGGGC 20042779
Query 134089 ATGTTTTGTGAG-AGAATAGCGACCACATTTGATTGTTCTTTACGCGTTTCATGAATAGA 134147
|| || |||| | | | ||||||||| | |||| || ||||| ||||| || |||
Sbjct 20042780 AT-TTATGTGGGCACATTAGCGACCAATCTCCATTGGCCTCGACGCGCTTCATAAAGAGA 20042838
Query 134148 TCGGGAATCCACAGGCCGAGCATTAAATCGCGAGCTTTAGTGTCTTCGGAGCCCATGTTG 134207
||||| ||||||||| || | | |||||| || | | || || ||| ||||
Sbjct 20042839 TCGGGTATCCACAGGGCGTAAAACAGATCGCGGGCCCGATTTTCCTCCTTGCCGGTGTTT 20042898
Query 134208 CGTCTCAAGTTG-AGAAACTCATAAATTTCCGGATGCCACGGCTCGATGTAGGCGGCGAG 134266
||| ||||| || |||||| | | |||| ||||| ||||| | ||| ||| |
Sbjct 20042899 T-TCTTAAGTTCCAGGAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAA 20042957
Query 134267 GGCACCTTTTCGCTTACCACCC---TGGTCGACGTGACGCACCATGTTGTTGAAGACTCT 134323
|||||| ||||| ||||| || || || | |||| ||| ||||||||||| ||
Sbjct 20042958 GGCACCGGGACGCTTGCCACCTCCTTGATCCACATAACGCGCCACATTGTTGAAGACCCT 20043017
Query 134324 CAACAT 134329
||||||
Sbjct 20043018 CAACAT 20043023
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| ||||| | | | ||||| ||||| || ||||| || || |||||||| |||
Sbjct 1136943 TACCACCGCGCAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGG 1137002
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| || || ||||| ||||| || || ||| |||| |||||||||||||| || |
Sbjct 1137003 ACAGGGTTCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGG 1137062
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || ||||||||||| || || || || | |||| |||||||| ||| |
Sbjct 1137063 GGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCCGAAGGCTCCA 1137122
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 118740
|||| | ||| | || |||||||| || ||||| || || || |||||||
Sbjct 1137123 CCTCCAAGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCATGG 1137173
Score = 109 bits (120), Expect = 5e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||||||||| | || ||||| || |||||||| || || | ||||| |||
Sbjct 20155533 CAGCACCAAGTGCAAAGTGGACTCCTTCTGAATGTTATAGTCAGAGAGGGTGCGGCCATC 20155474
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| ||||| || |||||| |||| |||||||||||||| ||||| || || || |||||
Sbjct 20155473 TTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTC 20155414
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
||| || ||| || | ||||| || |||| |||||||| | || | ||
Sbjct 20155413 CTGAATCTTGGCTTTGACATTTTCGATAGTATCCGAAGGTTCGACCTCAAGAGTGATGGT 20155354
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| || || || || || || ||||||||
Sbjct 20155353 CTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 20155321
>seq3325
Length=21082
Score = 156 bits (172), Expect = 4e-33
Identities = 160/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| | || ||||| || ||||||||||||||| || ||||| ||||||
Sbjct 20279 ACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAATCGGACAGGGTGCGACCATCCTCA 20220
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| ||||| ||| ||||||||||||||||||| || || |||||||||||||||
Sbjct 20219 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCTGGGGGGATGCCCTCCTTGTCTTGG 20160
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | ||| | |||||||| || ||||| | ||| | || |||
Sbjct 20159 ATCTTAGCCTTGACGTTTTCAATGGTGTCCGAAGGTTCCACCTCCAGGGTGATGGTCTTG 20100
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || |||||||| ||||| ||||||||
Sbjct 20099 CCAGTAAGAGTTTTGACAAAGATCTGCAT 20071
Score = 136 bits (150), Expect = 3e-27
Identities = 171/234 (73%), Gaps = 7/234 (3%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
|| ||||||| | | ||||||||| | || ||||| || || ||||||||||| |
Sbjct 21067 CCACCGCGTAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAC 21008
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| |||||| |||||| ||||| ||||| ||| | ||||||||||||||||| || ||
Sbjct 21007 AAAGTGCGACCATCCTCCAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCTGGGGGG 20948
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG--TGCT----- 118684
|| ||||||||||| ||||| || || | ||| | ||||||| |||
Sbjct 20947 ATTCCCTCCTTGTCCTGGATTTTCGCCTTTACGTTTTCAATAGTGTCCGAAGGCTCTTGG 20888
Query 118685 CTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||| ||||| | || | || || ||||||| ||| ||||| |||||||||||
Sbjct 20887 CTCCACCTCAAGAGTGATTGTCTTTCCGGTCAAAGTCTTTACGAAAATCTGCAT 20834
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
|| ||||||| | | ||||||||| | || ||||| || || ||||||||||| |
Sbjct 19841 CCACCGCGTAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAC 19782
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| |||||| |||||| ||||| ||||| ||| | ||||||||||||||||| || ||
Sbjct 19781 AAAGTGCGACCATCCTCCAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCTGGGGGG 19722
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| ||||||||||| || || || || | |||| ||| || | ||| ||
Sbjct 19721 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTATCAGAAGGCTCAACT 19662
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | || | ||||||||||||| ||| || ||||| ||||||||
Sbjct 19661 TCAAGAGTGATGGTTTTGCCGGTCAAAGTCTTGACAAAGATCTGCAT 19615
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
|| ||||||| | | ||||||||| | || ||||| || || ||||||||||| |
Sbjct 20069 CCACCGCGTAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAC 20010
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| |||||| |||||| ||||| ||||| ||| | ||||||||||||||||| || ||
Sbjct 20009 AAAGTGCGACCATCCTCCAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCTGGGGGG 19950
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| ||||||||||| || || || || | |||| ||| || | ||| ||
Sbjct 19949 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTATCAGAAGGCTCAACT 19890
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | || | ||||||||||||| ||| || ||||| ||||||||
Sbjct 19889 TCAAGAGTGATGGTTTTGCCGGTCAAAGTCTTGACAAAGATCTGCAT 19843
Score = 125 bits (138), Expect = 6e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||||| || ||||| || || |||||||| ||| || ||||| |||||
Sbjct 20507 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCC 20448
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|| ||||| || ||| |||| |||||||||||||| || || ||||||||||||||
Sbjct 20447 AGTTGTTTGCCGGCGAAGATAAGACGCTGCTGATCTGGGGGGATGCCCTCCTTGTCCTGG 20388
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
||||| || || | ||| | ||||||| ||| || || | || | || ||
Sbjct 20387 ATTTTAGCCTTTACGTTTTCAATAGTGTCCGAAGGCTCTACTTCAAGAGTGATGGTCTTT 20328
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||||| ||| || || |||||||||||
Sbjct 20327 CCGGTCAAAGTCTTGACGAAAATCTGCAT 20299
Score = 111 bits (122), Expect = 1e-19
Identities = 158/222 (71%), Gaps = 3/222 (1%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||||| || ||||| || || |||||||| ||| || ||||| |||||
Sbjct 19595 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCC 19536
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|| ||||| || ||| |||| |||||||||||||| || || ||||||||||| ||
Sbjct 19535 AGTTGTTTGCCGGCGAAGATAAGACGCTGCTGATCTGGGGGGATGCCCTCCTTATCCTGG 19476
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
||||| || || | || | || || | | ||| ||||| | || | || ||
Sbjct 19475 ATTTTGGCCTTCACATTCTCAATCGTATCGGAGGGCTCCACCTCCAAAGTAATGGTCTTT 19416
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCA---TGGCTTATTCT 118748
|| |||| || || ||||| ||||||| ||| |||||||
Sbjct 19415 CCAGTCAAGGTCTTCACAAAGATCTGCATTTTGGATTATTCT 19374
Score = 102 bits (112), Expect = 7e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
||||| || | || || || || || |||||||||||| || ||||| |||||
Sbjct 20735 ACCAAATGCAAAGTCGATTCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCGTCCTCC 20676
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|| ||||| || ||| |||| | ||||||||||| || || ||||||||||||||
Sbjct 20675 AGTTGTTTGCCGGCGAAGATCAATCGCTGCTGATCTGGGGGGATGCCCTCCTTGTCCTGG 20616
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | ||| | |||||| | ||| || || | ||| | || |||
Sbjct 20615 ATCTTGGCCTTCACATTTTCAATGGTGTCTGATGGCTCAACTTCCAAGGTGATGGTCTTG 20556
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || ||||| ||||||||
Sbjct 20555 CCAGTAAGTGTCTTGACAAAGATCTGCAT 20527
>seq4812
Length=908733
Score = 152 bits (168), Expect = 4e-32
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
||||| || | || ||||| || ||||||||||||||| || |||||| ||||||
Sbjct 620077 ACCAAATGCAAGGTCGACTCCTTCTGAATGTTGTAATCGGACAAAGTGCGACCATCCTCA 620136
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| ||||| ||| ||||||||||||||||||| || || || ||||||||||||
Sbjct 620137 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCTGGGGGAATACCCTCCTTGTCTTGG 620196
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || ||| || | ||| | |||||| | ||| ||||| | ||| | || |||
Sbjct 620197 ATCTTGGCTTTGACGTTTTCAATGGTGTCTGAAGGCTCCACCTCCAGGGTGATGGTCTTG 620256
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || |||||||| || || ||||||||
Sbjct 620257 CCAGTAAGAGTTTTGACGAAGATCTGCAT 620285
Score = 134 bits (148), Expect = 1e-26
Identities = 146/194 (75%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 118545 GACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCG 118604
||||| || || ||||| |||||| || |||||| ||||| ||||| ||||| |||
Sbjct 620500 GACTCCTTCTGGATGTTATAATCGGACAAAGTGCGACCGTCCTCAAGCTGCTTTCCGGCG 620559
Query 118605 TAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACC 118664
|||| |||||||||||||| || || || |||||||||||| ||||| || ||
Sbjct 620560 AAGATAAGACGCTGCTGATCTGGGGGAATACCCTCCTTGTCTTGGATTTTGGCCTTTACG 620619
Query 118665 TGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTT 118724
| ||| | |||||||| ||| ||||| | ||| | || ||||| || ||||||||
Sbjct 620620 TTTTCAATGGTGTCCGAAGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTAAGAGTTTTG 620679
Query 118725 ACAAAAATCTGCAT 118738
|| || ||||||||
Sbjct 620680 ACGAAGATCTGCAT 620693
Score = 120 bits (132), Expect = 3e-22
Identities = 143/194 (74%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||||| || ||||| || || |||||||| ||| || ||||| |||||
Sbjct 620305 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCC 620364
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|| ||||| || ||| |||| |||||||||||||| || || || ||||||||||||
Sbjct 620365 AGTTGTTTGCCGGCGAAGATAAGACGCTGCTGATCTGGGGGAATACCCTCCTTGTCTTGG 620424
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | ||| | |||||||| ||| ||||| | ||| | || |||
Sbjct 620425 ATCTTGGCCTTGACGTTTTCAATGGTGTCCGAAGGCTCCACCTCCAGGGTGATGGTCTTG 620484
Query 118710 CCGGTCAGAGTTTT 118723
|| || ||||||||
Sbjct 620485 CCAGTAAGAGTTTT 620498
Score = 93.3 bits (102), Expect = 4e-14
Identities = 90/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||||| || ||||| || || ||||||||||| || |||||| |||||
Sbjct 620713 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGACAAAGTGCGACCGTCCTCA 620772
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||||| ||||| ||| |||| | ||||| ||||| || || || |||||||||||
Sbjct 620773 AGCTGCTTTCCGGCGAAGATCAATCGCTGTTGATCTGGGGGGATTCCCTCCTTGTC 620828
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || |||||||| || || ||||| ||||| || || || ||
Sbjct 619861 GTCGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCGTCCTCCAGTTGCTTGCCG 619920
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| |||||||||||||||| || || || || |||||||||||| || || ||
Sbjct 619921 GCGAAGATGAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTG 619980
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | ||| | ||| || | |||||| || | || | || || ||||||| |||
Sbjct 619981 ACGTTTTCAATGGTATCAGAAGGCTCGACTTCCAGAGTAATGGTCTTTCCGGTCAAAGTC 620040
Query 118722 TTTACAAAAATCTGCAT 118738
|| || || || |||||
Sbjct 620041 TTCACGAAGATTTGCAT 620057
>seq2
Length=2985096
Score = 136 bits (150), Expect = 3e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
||||||| || | | | ||||||||||| || ||||| || || |||||||| |||
Sbjct 123967 TACCTCCACGGAGACGAAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 123908
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| |||||| |||||| | ||| ||||| ||| |||| ||||||||||| || || |
Sbjct 123907 ACAAAGTGCGTCCATCCTCCAACTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGGG 123848
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| |||||||||||||| || || ||||| | |||| ||| || | ||| |
Sbjct 123847 GAATGCCCTCCTTGTCCTGGATCTTGGCCTTAACATTCTCGATGGTATCGGAAGGCTCAA 123788
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|||| | || | || ||||| ||||| ||||| || ||||| ||||||
Sbjct 123787 CCTCCAAAGTGATGGTCTTGCCAGTCAGGGTTTTCACGAAAATTTGCATG 123738
Score = 102 bits (112), Expect = 7e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
||||| || | |||||||| || || || ||||| ||| || |||||| |||||
Sbjct 124175 ACCAAATGCAAAGTAGACTCCTTCTGGATATTGTAGTCGGACAAAGTGCGTCCGTCCTCC 124116
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
| ||| ||||| ||| |||| | ||||||||| || || || ||||||||||||||
Sbjct 124115 AACTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 124056
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| ||| || | ||| ||||| | || | || |||
Sbjct 124055 ATCTTGGCCTTCACGTTCTCGATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTCTTG 123996
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| ||||| || || || || ||||||||
Sbjct 123995 CCAGTCAGGGTCTTCACGAAGATCTGCAT 123967
>seq5016
Length=829163
Score = 98.7 bits (108), Expect = 9e-16
Identities = 115/154 (75%), Gaps = 6/154 (4%)
Strand=Plus/Minus
Query 47168 TCGCTTCAATGTTACCCAGATCGCCTACGTGACG---CTCGGCGGCGTTGGGAGCGCCGT 47224
|||| |||||||| |||||||| || | |||||| |||| ||||| ||||| ||||
Sbjct 681957 TCGCCTCAATGTTGCCCAGATCTCCCAGGTGACGATTCTCGTCGGCG---GGAGCTCCGT 681901
Query 47225 GATTGCGGCCCAACGGATTATAGTGTTCGCCGGCCGACGTGCAGCCGTTGCTCGTGTCGC 47284
| | ||| | || || |||| |||| |||| ||||||||||| | |||| |
Sbjct 681900 GCTCCTTGCCATAGGGGTTGAAGTGCGGTCCGGACGACATGCAGCCGTTGGTGTTGTCCC 681841
Query 47285 CGAATTCGTGCACGTGAAATCCGTGAAGCCCCTT 47318
| || ||||| ||||| ||||||||||| |||||
Sbjct 681840 CAAACTCGTGAACGTGGAATCCGTGAAGGCCCTT 681807
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433784506166560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |