Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq5978 93.3 9e-14
>seq5978
Length=4749261
Score = 93.3 bits (102), Expect = 9e-14
Identities = 195/285 (68%), Gaps = 13/285 (5%)
Strand=Plus/Minus
Query 254106 CTCGAGCTGAACGCTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACT 254165
|||||||||||||| || || || || || | | || || ||| |||||||||||
Sbjct 537520 CTCGAGCTGAACGCCTCCGATGAGCGGGGCATTAATGTGGTGCGCACCAAGATCAAGAAC 537461
Query 254166 TTCTCCAAGATGTCG------ATTTCGTCGTTCCAAC--CCGGC--TGTCCGCCTTTCAA 254215
||||| || | ||| | | | ||| | | | ||| |||||||| || ||
Sbjct 537460 TTCTCGCAGCTCTCGGCCAGCAGTGTG-CGTCCGGATGGCAGGCCGTGTCCGCCCTTTAA 537402
Query 254216 GCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCG 254275
| || | |||||||||||||| ||| | ||||| | ||| ||||||||||| || ||
Sbjct 537401 GATCATCATCCTGGACGAGGCTGACTCGATGACCCATGCCGCCCAGTCCGCCCTGCGTCG 537342
Query 254276 AACGATGGAGACGCA-CTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGA 254334
|| ||||||| | | ||| | || || || |||||| | |||||||| || || |
Sbjct 537341 CACCATGGAGAAGGAGAGCCGGAG-CACCCGCTTCTGCCTGATTTGCAACTATGTCTCCA 537283
Query 254335 AGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379
|||||| | || | | || || ||| | || || || ||||
Sbjct 537282 GGATCATTGTGCCCATCACCTCGCGTTGCTCTAAATTCCGCTTCA 537238
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073646983754240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |