Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq1 396 3e-105
>seq1
Length=22559587
Score = 396 bits (438), Expect = 3e-105
Identities = 1223/1884 (65%), Gaps = 30/1884 (2%)
Strand=Plus/Plus
Query 64826 ATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGT---TTCGTACGTAGATAGTA 64882
|| |||||| | ||||| ||||| |||| ||| | | || || || || || ||
Sbjct 20041581 ATTCTTGTCTACAGTGAACTGAAT---AGCGTTTGCAGCTGGCTTTGTGCGCAGGTAATA 20041637
Query 64883 CATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATA 64942
|||||| ||||||||||| |||| ||||| || || || ||||| ||
Sbjct 20041638 CATTCCAGTTTTTAGACCAGCTTTCCAGGAATAAAAGTGTATGGAAGTAAGTTTTCCGTA 20041697
Query 64943 ACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTC 65002
| || ||||| | ||| || || | || ||||| ||||| || || || || | ||
Sbjct 20041698 GTTTGGCTCTGCCACATGAATGTTGAACGACTGACTCTGATCTATAAACGCACCTCGATC 20041757
Query 65003 TGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCT 65061
||| ||||| || || | | |||| || |||||||| | |||||| || | ||||
Sbjct 20041758 TGCGGCCATCTTAATAGTGGACTTTACTGAGATTTCCCACACAGTTTTGTACAGATCGCG 20041817
Query 65062 TAATATCTTCTGGAAGGTTTG--TATTCTGAATGGATCCACCATCTGCCA-TAATCCTAT 65118
| ||| ||| || | |||| || || || || || ||| | | || |
Sbjct 20041818 AACCTTCTGGGGGATGGCCTCAATATTTTGGATTGAGCC-CCTGCTGGAAATGATTTGGT 20041876
Query 65119 TCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAA 65178
|||| || || || | ||| || | ||| |||| | || | | ||| | ||||
Sbjct 20041877 TCTTCATATCGTCGTCCCACAAGTCCAGCTCCGTTAGGTCCCTTAACAAATGATGGTTAA 20041936
Query 65179 CTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCA 65238
| ||||| ||||||||||||| |||| || || |||||||| | || || || || |
Sbjct 20041937 CCACTTGGAATTCTCCAGACAGAACTCGCCTGGTATAAATATTCGTTGTGTAAGGCTCGA 20041996
Query 65239 CAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATA 65298
|| || || || |||| |||||||||||| || ||||| |||||||| || ||||| |
Sbjct 20041997 ATGATTCGTTGTTACCCATAATTTGAGCAGTAGAAGCAGTGGGCATAGGAGCAACCAACA 20042056
Query 65299 AACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGAT 65358
|| | | ||||| | |||| || || || | ||| | |||||| |
Sbjct 20042057 GGGAGTTCCGGACACCGTGCTTCTTGATGGACTCCTTCAGTTTCTGCCAGTCCCAAAGGT 20042116
Query 65359 CCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTA 65418
|| || | || ||||| || || || || |||
Sbjct 20042117 TCGTTGGCTCTTTGTCCCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCTTCCCT 20042176
Query 65419 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 65478
|||| || || ||||| ||||| ||| || ||||||||||| || || || || ||||
Sbjct 20042177 CATAGGTTTCATATGGACCTTCGATCTGGGCCAGTTCACAACTGGCTTCCAAAGCGCCGT 20042236
Query 65479 AATAAATGGTTTCGAAGATCTTCTTATTTA-GATCTTGTGCTTCCAGGCTATCAAATGGA 65537
| || || |||||||| |||| || ||| | || | ||||| || ||| | ||
Sbjct 20042237 AGTAGATAGTTTCGAAAATCTGCTGATTCAAGAGGCCG-GCTTCATCACTTTCATAGGGG 20042295
Query 65538 TAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGT 65597
| | |||||| || ||||| || ||||| || ||||| || || | || | |||
Sbjct 20042296 AACCGCATGAGAATCAAGGCGTCAGCGAATCCCTGGACACCGATGCCCACGGGACGATGC 20042355
Query 65598 CTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTG 65657
||| ||| || | | || ||||| | || || | |||||||| || || || ||
Sbjct 20042356 CTCAAATTGGATTTCTTGGCCTCTGGCAGGGGGTAGAAGTTAATATCGATTATCTTGTTA 20042415
Query 65658 AGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCTCATCT 65717
||||| || || ||| || ||||| ||||| ||||| || || ||
Sbjct 20042416 AGATTCTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTTGAAATCGTATGTCTTCTCG 20042475
Query 65718 A---TTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCA 65774
| ||||||||||| | || | ||||||| || ||||| || | ||||| | |
Sbjct 20042476 GGAGTGACAAACATGTTGAGGGCGATGGATGCCAAGTTGCAAACTGCAATCTCATCCGGA 20042535
Query 65775 TCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGT 65834
| | ||| | || || || ||||| | ||| |||||||||||||| || | ||| ||
Sbjct 20042536 GCGGAATACTCTACGATTTCTGTGCACAAATTGCTACACTTGATGGTGCCGACATTCTGC 20042595
Query 65835 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 65894
|| || ||||| |||| || ||||||||| | | ||| | || | |||||||| | |
Sbjct 20042596 TGGTTGCTCTTCCTGTTGCAGGCATCCTTAAACAACATGTAGGGGTTTCCAGTTTCGACC 20042655
Query 65895 TGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTAT-CTCTT 65953
|| | ||| ||||| || ||| | | | ||||||| | || | ||| | |
Sbjct 20042656 TGTGCTTCAATAATGGCAAACCACAGGGATTGAGCCTTAAC---AGTTCTGTTGGCACGA 20042712
Query 65954 TTCTCTTTCGTATAGTGT--ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT 66011
||||| | ||| | |||||| |||||| || || ||||| |||| || |
Sbjct 20042713 CCCTCTTGCTCATATTTCTCATACAACTTTTCGAATTCATCGCCCCACACATCGTGAAGC 20042772
Query 66012 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 66071
||||| |||| || || ||||| | |||||| ||||| | ||| || || ||||||
Sbjct 20042773 CCAGGGCATTTATGTGGGCACATTAGCGACCAATCTCCATTGGCCTCGACGCGCTTCATA 20042832
Query 66072 AAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCT 66131
|||||||| || ||||| || || ||| | ||| | || | || |||||| || ||
Sbjct 20042833 AAGAGATCGGGTATCCACAGGGCGTAAAACAGATCGCGGGCCCGATTTTCCTCCTTGCCG 20042892
Query 66132 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATG 66191
|| || || ||||| || |||||| | | | ||| | ||||| || |||| ||| |||
Sbjct 20042893 GTGTTTTTCTTAAGTTCCAGGAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATG 20042952
Query 66192 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 66251
|| | | || || || ||| ||||| ||||| | || | || || || |
Sbjct 20042953 GCAAAGGCACCGGGACGCTTGCCACCTCCTTGATCCACATAACGCGCCACATTGTTGAAG 20043012
Query 66252 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 66311
|| |||||||| |||| | ||||||||||| ||||| || ||| | || || | ||
Sbjct 20043013 ACCCTCAACATGGGAACCAAGCCATTGGATGTGCCATTCGTTCCGCAAATCGAGGTGCCC 20043072
Query 66312 CTTGCACGAATATTACTAATTGA----TAGACCTATTCCCCCTGCCATTTTAGAGATTAA 66367
|||| || || ||| || || || || || || ||| ||| ||||| ||
Sbjct 20043073 TTTGCCCGGAT----GCAATGGACGTTAAGTCCAATGCCGCCGGCCGATTTCGAGATCAA 20043128
Query 66368 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 66427
|| || ||| | | | | | |||||||| ||| || || ||||| | | ||
Sbjct 20043129 GGCACACTGTTCCACGGACTTAAAAATGCCCTCGATAGAGTCGGCCGTCATGGTCAAGAG 20043188
Query 66428 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 66487
|| || |||| || | ||| | || | || ||| | || || || || ||
Sbjct 20043189 GAAGCAAGACGACAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGTGTTGGCGACGCATG 20043248
Query 66488 CGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTG 66547
||| || || || || | ||||| || || || | || | |||||||||
Sbjct 20043249 CGTGAAGTATCGCTCCGACAAGAGATTATAAGTTTCCACGGCCGCATCTATATCCTCCCC 20043308
Query 66548 ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTT 66607
||| ||||| | || || ||||| ||||| || || || | || | || || |||
Sbjct 20043309 ATGGATTCCGATCGCCACGCGCATCAACATATGTTGCGGACGCTCTGCAATTTTTCCGTT 20043368
Query 66608 TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 66667
| | |||| || ||||| ||| | || ||||| ||||| ||||| || ||||||
Sbjct 20043369 TCTCTTCAGCAGATAGGAACGTTCTAGGGTCTTAAACCCAAAGTAGTTATACCCAAAGTC 20043428
Query 66668 TCGTTCGTAAATAATAACCGAGTT 66691
|| ||||| || ||| |||||
Sbjct 20043429 GCGGTCGTAGATTATAGAAGAGTT 20043452
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658101388251200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |