Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq1 232 6e-56
>seq1
Length=22559587
Score = 232 bits (256), Expect = 6e-56
Identities = 330/465 (71%), Gaps = 6/465 (1%)
Strand=Plus/Minus
Query 20889 GGAAACGGACGCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAACGTGGTTGTTGTAA 20948
|| || |||||||| || | | |||||| | ||| || || || ||||| |||
Sbjct 6128290 GGGAAGGGACGCGGCGTGCGCTCCAGCTGCTCCTTCAGCGGCTCCACATGGTTCAGGTAG 6128231
Query 20949 ACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTGAGCG 21008
| ||| | ||| |||| |||||||||||||||||| || |||| ||||| || || |||
Sbjct 6128230 ATGTGCGTGTCGCCCATGGTGTGCACAAAGTCTCCGGGCTTCAGACCCGTCACATGGGCG 6128171
Query 21009 ATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCG 21068
|||| | || || ||||||||| ||||||||| || || || || ||||||||||||
Sbjct 6128170 ATCATGTGGGTGAGCAGGGCGTAGGAGGCGATGTTGAAGGGCACGCCCAGGCCCATGTCG 6128111
Query 21069 GCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC------ACGTAAAACTGA 21122
||| ||||||||||||||||||||| ||||| || || | | ||||| |||||
Sbjct 6128110 GCGCTCCTCTGGTACAGCTGGCAGGAAAGCTCACCGCGCGTCTCTGAGACGTAGAACTGT 6128051
Query 21123 CACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCGCAC 21182
|| ||| || ||||| || |||||| | | |||| || ||||| || ||
Sbjct 6128050 GCCAGGCAGTGGCATGGAGGAAGGGCCATCTTTGGTATGTCCAGTGGATTCCATGCCGAC 6127991
Query 21183 ATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGATCCACCACGTAACGCAGCTGG 21242
|| | |||||||| || || | || || || | ||| | |||||||||
Sbjct 6127990 ATGATGATGCGCCTGTCCGAAGGATTATTCTTGATGGTCTCGATCACCTGGCGCAGCTGG 6127931
Query 21243 TCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAATGTCTC 21302
|| | |||| || | ||| | | ||||| | |||||||||||||||||| | |
Sbjct 6127930 TCGATGCCCTTGCCGTTGTAATCGTCGTCGCATTTGCCGTACTCCGCCCCAAAATGACGC 6127871
Query 21303 CACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCC 21347
|||||||| ||||| ||||| ||||| ||||| || ||| |||
Sbjct 6127870 CACTGGAAGCCGTATACCGGGCCCAGGTCGCCGACGGCGCGCTCC 6127826
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427730746646400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |