Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1 378 1e-99 >seq1 Length=22559587 Score = 378 bits (418), Expect = 1e-99 Identities = 1211/1872 (65%), Gaps = 28/1872 (1%) Strand=Plus/Plus Query 70791 CTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCT---TTCGTACGTAGATAGTACAT 70847 |||||| | || |||||||| || | ||| ||| || || || || || ||||| Sbjct 20041584 CTTGTCTACAGTGAACTGAAT---AGCGTTTGCAGCTGGCTTTGTGCGCAGGTAATACAT 20041640 Query 70848 GCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCT 70907 || ||||||||||| |||| ||||| || || || ||||| ||| | Sbjct 20041641 TCCAGTTTTTAGACCAGCTTTCCAGGAATAAAAGTGTATGGAAGTAAGTTTTCCGTAGTT 20041700 Query 70908 AGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 70967 || || || | ||||| || | ||||||||| ||||| || || || || | ||||| Sbjct 20041701 TGGCTCTGCCACATGAATGTTGAACGACTGACTCTGATCTATAAACGCACCTCGATCTGC 20041760 Query 70968 AGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAA 71026 ||||| || || | | |||| || |||||||| | |||||| || | |||| | Sbjct 20041761 GGCCATCTTAATAGTGGACTTTACTGAGATTTCCCACACAGTTTTGTACAGATCGCGAAC 20041820 Query 71027 TATCTTCTGGAAGGTTTG--TATTCTGAATGGATCCACCATCTGCAA-TAATCCTATTTT 71083 ||| ||| || | |||| || || || || || ||| || | || || | Sbjct 20041821 CTTCTGGGGGATGGCCTCAATATTTTGGATTGAGCC-CCTGCTGGAAATGATTTGGTTCT 20041879 Query 71084 TGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTA 71143 | || || || | ||| || | ||| |||| | || | | |||| | ||||| | Sbjct 20041880 TCATATCGTCGTCCCACAAGTCCAGCTCCGTTAGGTCCCTTAACAAATGATGGTTAACCA 20041939 Query 71144 CTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTG 71203 |||| ||||||||||||| |||| | || |||||||| | || || || || | || Sbjct 20041940 CTTGGAATTCTCCAGACAGAACTCGCCTGGTATAAATATTCGTTGTGTAAGGCTCGAATG 20041999 Query 71204 ACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGAC 71263 | || || || |||| |||||||||||| || ||||| |||||||| || ||||| || Sbjct 20042000 ATTCGTTGTTACCCATAATTTGAGCAGTAGAAGCAGTGGGCATAGGAGCAACCAACAGGG 20042059 Query 71264 TATTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCG 71323 || | | ||| || ||| || || || | ||| | |||||| | || Sbjct 20042060 AGTTCCGGACACCGTGCTTCTTGATGGACTCCTTCAGTTTCTGCCAGTCCCAAAGGTTCG 20042119 Query 71324 ATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCAT 71383 ||| | || || || || || ||| ||| Sbjct 20042120 TTGGCTCTTTGTCCCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCAT 20042179 Query 71384 ATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAAT 71443 | || || ||||| ||||| | | ||| ||||||||||| || || || || || || | Sbjct 20042180 AGGTTTCATATGGACCTTCGATCTGGGCCAGTTCACAACTGGCTTCCAAAGCGCCGTAGT 20042239 Query 71444 AAATGGTTTCGAAAATCTTCTTATTGA-GATCTTGTGCTTCCGGGCTATCAAATGGATAA 71502 | || ||||||||||||| || ||| | || | ||||| || ||| | || | Sbjct 20042240 AGATAGTTTCGAAAATCTGCTGATTCAAGAGGCCG-GCTTCATCACTTTCATAGGGGAAC 20042298 Query 71503 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTC 71562 | |||||| || ||||| || ||||| || || || || || | || | || ||| Sbjct 20042299 CGCATGAGAATCAAGGCGTCAGCGAATCCCTGGACACCGATGCCCACGGGACGATGCCTC 20042358 Query 71563 TTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 71622 ||| || | | || ||||| | || || | |||||||| || || || || ||| Sbjct 20042359 AAATTGGATTTCTTGGCCTCTGGCAGGGGGTAGAAGTTAATATCGATTATCTTGTTAAGA 20042418 Query 71623 TTTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCCCATCTA-- 71680 || || | ||| || ||||| ||||| ||||| || || || Sbjct 20042419 TTCTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTTGAAATCGTATGTCTTCTCGGGA 20042478 Query 71681 -TTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCG 71739 | ||||||| ||| | ||| | ||||||| || ||||| || | ||||| | | || Sbjct 20042479 GTGACAAACATGTTGAGGGCGATGGATGCCAAGTTGCAAACTGCAATCTCATCCGGAGCG 20042538 Query 71740 GCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGA 71799 | ||| | || ||||| ||||| | ||| |||||||||||||| || | ||| || || Sbjct 20042539 GAATACTCTACGATTTCTGTGCACAAATTGCTACACTTGATGGTGCCGACATTCTGCTGG 20042598 Query 71800 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGA 71859 || ||||| |||| || ||||||||| | | || | || | |||||||| | ||| Sbjct 20042599 TTGCTCTTCCTGTTGCAGGCATCCTTAAACAACATGTAGGGGTTTCCAGTTTCGACCTGT 20042658 Query 71860 GATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCT 71919 | ||| ||||| || ||| | | | ||||||| | | | ||| | | || Sbjct 20042659 GCTTCAATAATGGCAAACCACAGGGATTGAGCCTTAACAGTTCTGTTGG--CACGACCCT 20042716 Query 71920 CTT--TCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAG 71977 ||| || |||| ||| || |||||| || || ||||| ||| || | |||| Sbjct 20042717 CTTGCTCATATTTCTCATACAACTTTTCGAATTCATCGCCCCACACATCGTGAAGCCCAG 20042776 Query 71978 GACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGA 72037 | |||| || || ||||| | ||||| ||||||| | | || || |||||||||| Sbjct 20042777 GGCATTTATGTGGGCACATTAGCGACCAATCTCCATTGGCCTCGACGCGCTTCATAAAGA 20042836 Query 72038 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTAT 72097 |||| || ||||| || || ||| ||||| | || | || ||||| || || || | Sbjct 20042837 GATCGGGTATCCACAGGGCGTAAAACAGATCGCGGGCCCGATTTTCCTCCTTGCCGGTGT 20042896 Query 72098 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 72157 | || ||||| || |||||| | | | ||| || ||||| || |||| ||| ||||| | Sbjct 20042897 TTTTCTTAAGTTCCAGGAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAA 20042956 Query 72158 TAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 72217 | || || || ||| ||||| ||||| | || | || || || | || | Sbjct 20042957 AGGCACCGGGACGCTTGCCACCTCCTTGATCCACATAACGCGCCACATTGTTGAAGACCC 20043016 Query 72218 TCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGG 72277 ||||||| |||| | |||||||||| ||||| || ||| | || || | || | | Sbjct 20043017 TCAACATGGGAACCAAGCCATTGGATGTGCCATTCGTTCCGCAAATCGAGGTGCCCTTTG 20043076 Query 72278 CACGAATATTGCTAATTGA----TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 72333 | || | ||| ||| || || || || || || ||| ||| ||||| || || Sbjct 20043077 CCCGGA---TGC-AATGGACGTTAAGTCCAATGCCGCCGGCCGATTTCGAGATCAAGGCA 20043132 Query 72334 CATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAA 72393 || ||| | | | | | |||||||| ||| || || ||||| | | || || Sbjct 20043133 CACTGTTCCACGGACTTAAAAATGCCCTCGATAGAGTCGGCCGTCATGGTCAAGAGGAAG 20043192 Query 72394 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 72453 || |||| || | ||| | || | || ||| | || || || || ||||| Sbjct 20043193 CAAGACGACAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGTGTTGGCGACGCATGCGTG 20043252 Query 72454 AACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGT 72513 || || || |||| ||||| || || || | || | ||||||||| ||| Sbjct 20043253 AAGTATCGCTCCGACAAGAGATTATAAGTTTCCACGGCCGCATCTATATCCTCCCCATGG 20043312 Query 72514 ATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATT 72573 ||||| | ||| || ||||| |||||||| || || | || | || || ||| | Sbjct 20043313 ATTCCGATCGCCACGCGCATCAACATATGTTGCGGACGCTCTGCAATTTTTCCGTTTCTC 20043372 Query 72574 TTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGT 72633 |||| || ||||| ||| | || ||||| ||||| ||||| || |||||| || Sbjct 20043373 TTCAGCAGATAGGAACGTTCTAGGGTCTTAAACCCAAAGTAGTTATACCCAAAGTCGCGG 20043432 Query 72634 TCGTAAATAATA 72645 ||||| || ||| Sbjct 20043433 TCGTAGATTATA 20043444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671066381396800