Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq1 369 5e-97
seq4563 156 5e-33
>seq1
Length=22559587
Score = 369 bits (408), Expect = 5e-97
Identities = 1217/1884 (65%), Gaps = 30/1884 (2%)
Strand=Plus/Plus
Query 61982 ATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGT---TTCGTACGTAGATAGTA 62038
|| |||||| | ||||| ||||| |||| ||| | | || || || || || ||
Sbjct 20041581 ATTCTTGTCTACAGTGAACTGAAT---AGCGTTTGCAGCTGGCTTTGTGCGCAGGTAATA 20041637
Query 62039 CATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATA 62098
|||||| ||||||||||| |||| ||||| || || || ||||| ||
Sbjct 20041638 CATTCCAGTTTTTAGACCAGCTTTCCAGGAATAAAAGTGTATGGAAGTAAGTTTTCCGTA 20041697
Query 62099 ACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTC 62158
| || ||||| | ||| || || | || ||||| ||||| || || || || | ||
Sbjct 20041698 GTTTGGCTCTGCCACATGAATGTTGAACGACTGACTCTGATCTATAAACGCACCTCGATC 20041757
Query 62159 TGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCT 62217
||| ||||| || || | | |||| || |||||||| | |||||| || | ||||
Sbjct 20041758 TGCGGCCATCTTAATAGTGGACTTTACTGAGATTTCCCACACAGTTTTGTACAGATCGCG 20041817
Query 62218 TAATATCTTCTGGAAGGTTTG--TATTCTGAATGGATCCACCATCTGCCA-TAATCCTAT 62274
| ||| ||| || | |||| || || || || || ||| | | || |
Sbjct 20041818 AACCTTCTGGGGGATGGCCTCAATATTTTGGATTGAGCC-CCTGCTGGAAATGATTTGGT 20041876
Query 62275 TCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAA 62334
|||| || || || | ||| || | ||| |||| | || | | ||| | ||||
Sbjct 20041877 TCTTCATATCGTCGTCCCACAAGTCCAGCTCCGTTAGGTCCCTTAACAAATGATGGTTAA 20041936
Query 62335 CTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCA 62394
| ||||| ||||||||||||| |||| || || |||||||| | || || || || |
Sbjct 20041937 CCACTTGGAATTCTCCAGACAGAACTCGCCTGGTATAAATATTCGTTGTGTAAGGCTCGA 20041996
Query 62395 CCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATA 62454
|| || || || |||| |||||||||||| || ||||| |||||||| || ||||| |
Sbjct 20041997 ATGATTCGTTGTTACCCATAATTTGAGCAGTAGAAGCAGTGGGCATAGGAGCAACCAACA 20042056
Query 62455 AACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGAT 62514
|| | | ||||| | |||| || || || | ||| | |||||| |
Sbjct 20042057 GGGAGTTCCGGACACCGTGCTTCTTGATGGACTCCTTCAGTTTCTGCCAGTCCCAAAGGT 20042116
Query 62515 CCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTA 62574
|| || | || ||||| || || || || |||
Sbjct 20042117 TCGTTGGCTCTTTGTCCCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCTTCCCT 20042176
Query 62575 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 62634
|||| || || ||||| ||||| ||| || ||||||||||| || || || || ||||
Sbjct 20042177 CATAGGTTTCATATGGACCTTCGATCTGGGCCAGTTCACAACTGGCTTCCAAAGCGCCGT 20042236
Query 62635 AATAAATGGTTTCGAAGATCTTCTTATTTA-GATCTTGTGCTTCCAGGCTATCAAATGGA 62693
| || || |||||||| |||| || ||| | || | ||||| || ||| | ||
Sbjct 20042237 AGTAGATAGTTTCGAAAATCTGCTGATTCAAGAGGCCG-GCTTCATCACTTTCATAGGGG 20042295
Query 62694 TAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGT 62753
| | |||||| || ||||| || ||||| || ||||| || || | || | |||
Sbjct 20042296 AACCGCATGAGAATCAAGGCGTCAGCGAATCCCTGGACACCGATGCCCACGGGACGATGC 20042355
Query 62754 CTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTG 62813
||| ||| || | | || ||||| | || || | |||||||| || || || ||
Sbjct 20042356 CTCAAATTGGATTTCTTGGCCTCTGGCAGGGGGTAGAAGTTAATATCGATTATCTTGTTA 20042415
Query 62814 AGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATCT 62873
||||| || || ||| || ||||| ||||| ||||| || | ||
Sbjct 20042416 AGATTCTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTTGAAATCGTATGTCTTCTCG 20042475
Query 62874 A---TTACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCA 62930
| ||||||||||| | ||| | ||||||| || ||||| || | ||||| | |
Sbjct 20042476 GGAGTGACAAACATGTTGAGGGCGATGGATGCCAAGTTGCAAACTGCAATCTCATCCGGA 20042535
Query 62931 TCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGT 62990
| | ||| | || || || ||||| | ||| ||||||||||| || || | ||| ||
Sbjct 20042536 GCGGAATACTCTACGATTTCTGTGCACAAATTGCTACACTTGATGGTGCCGACATTCTGC 20042595
Query 62991 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 63050
|| || ||||| |||| || ||||||||| | | ||| | || | |||||||| | |
Sbjct 20042596 TGGTTGCTCTTCCTGTTGCAGGCATCCTTAAACAACATGTAGGGGTTTCCAGTTTCGACC 20042655
Query 63051 TGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTAT-CTCCT 63109
|| | ||| ||||| || ||| | | | ||||||| | || | ||| | |
Sbjct 20042656 TGTGCTTCAATAATGGCAAACCACAGGGATTGAGCCTTAAC---AGTTCTGTTGGCACGA 20042712
Query 63110 TTCTCTTTCGTATAGTGT--ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT 63167
||||| | ||| | |||||| |||||| || || ||||| |||| || |
Sbjct 20042713 CCCTCTTGCTCATATTTCTCATACAACTTTTCGAATTCATCGCCCCACACATCGTGAAGC 20042772
Query 63168 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63227
||||| |||| || || ||||| | |||||| ||||| | ||| || || ||||||
Sbjct 20042773 CCAGGGCATTTATGTGGGCACATTAGCGACCAATCTCCATTGGCCTCGACGCGCTTCATA 20042832
Query 63228 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 63287
|||||||| || ||||| || || ||| ||||| | || | || |||||| || ||
Sbjct 20042833 AAGAGATCGGGTATCCACAGGGCGTAAAACAGATCGCGGGCCCGATTTTCCTCCTTGCCG 20042892
Query 63288 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63347
|| || || ||||| || |||||| | | | ||| || ||||| || |||| ||| |||
Sbjct 20042893 GTGTTTTTCTTAAGTTCCAGGAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATG 20042952
Query 63348 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63407
|| | | || || || ||| ||||| ||||| | || | || || || |
Sbjct 20042953 GCAAAGGCACCGGGACGCTTGCCACCTCCTTGATCCACATAACGCGCCACATTGTTGAAG 20043012
Query 63408 ACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCA 63467
|| |||||||| |||| | || || ||| | ||||| || ||| | || || | ||
Sbjct 20043013 ACCCTCAACATGGGAACCAAGCCATTGGATGTGCCATTCGTTCCGCAAATCGAGGTGCCC 20043072
Query 63468 CTGGCACGAATATTACTAATTGA----TAGACCTATTCCCCCTGCCATTTTAGAGATTAA 63523
| || || || ||| || || || || || || ||| ||| ||||| ||
Sbjct 20043073 TTTGCCCGGAT----GCAATGGACGTTAAGTCCAATGCCGCCGGCCGATTTCGAGATCAA 20043128
Query 63524 TGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAG 63583
|| || ||| | | | | | || ||||| || || | ||||| | | ||
Sbjct 20043129 GGCACACTGTTCCACGGACTTAAAAATGCCCTCGATAGAGTCGGCCGTCATGGTCAAGAG 20043188
Query 63584 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 63643
|| || |||| || | ||| | || | || ||| | || || || || ||
Sbjct 20043189 GAAGCAAGACGACAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGTGTTGGCGACGCATG 20043248
Query 63644 CGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTG 63703
||| || || || || | ||||| || || || | || | |||||||||
Sbjct 20043249 CGTGAAGTATCGCTCCGACAAGAGATTATAAGTTTCCACGGCCGCATCTATATCCTCCCC 20043308
Query 63704 ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTT 63763
||| ||||| | || || ||||| ||||| || || || | || | || || |||
Sbjct 20043309 ATGGATTCCGATCGCCACGCGCATCAACATATGTTGCGGACGCTCTGCAATTTTTCCGTT 20043368
Query 63764 TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 63823
| | |||| || ||||| ||| | || ||||| ||||| ||||| || ||||||
Sbjct 20043369 TCTCTTCAGCAGATAGGAACGTTCTAGGGTCTTAAACCCAAAGTAGTTATACCCAAAGTC 20043428
Query 63824 TCGTTCGTAAATAATAACCGAGTT 63847
|| ||||| || ||| |||||
Sbjct 20043429 GCGGTCGTAGATTATAGAAGAGTT 20043452
>seq4563
Length=14502029
Score = 156 bits (172), Expect = 5e-33
Identities = 474/730 (65%), Gaps = 3/730 (0%)
Strand=Plus/Minus
Query 33004 ACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAAT 33063
|||||||| ||||| || ||||| || || || || || || ||||| ||||
Sbjct 3739895 ACTCCCATGCGCTGGTACTCGCCCACCTTCTTCTCAAAGAAGTTCGTCTTTCCGTCCAGC 3739836
Query 33064 GATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAAT 33123
|| || | |||||||| | ||| || || | ||| || ||||| || | |||
Sbjct 3739835 GAGATCATCTCCATGAAGTTAAAGGGGTTCTTGGTATTGTAGATTTTGCCAACGCTCAAC 3739776
Query 33124 TCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATT 33183
|| | || || ||||| |||||||| || || ||| | || || |||||
Sbjct 3739775 TCCACCAGCAGTCGGTCCGCCACGAATTCAATGTACTGCGACATAAGATCGCAGTTCATG 3739716
Query 33184 CCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCT 33243
|| || || || || || | || | || | || || || ||||||| ||||||||
Sbjct 3739715 CCGATGAGGTTTACGGGCAAGGCATCGGTTAAGAACTCCTGCTCAATGGCCACCGCATCG 3739656
Query 33244 GTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAA 33303
|| || | | | || || ||| | |||| || || | |||||||
Sbjct 3739655 CGGATGATCTCGATGATGCGCTCGCGCCTGGGTCGCTGCACCAAGTGCTGGAACATCAGC 3739596
Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363
|| || ||||| |||| |||||||| | || || |||||||| || || |||
Sbjct 3739595 ACGGCAAAGTCGCAATGCAAGCCCTCGTCGCGGGAGATAAGCTCGTTGGAGAAGGTCAGT 3739536
Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423
|| ||||| || || ||||| || ||||| || ||||| || || || ||||||
Sbjct 3739535 CCCGGCATCAGACCGCGCTTCTTCAGCCAGAAAATGGAGGCAAAGCTGCCGCTGAAGAAG 3739476
Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGC-GCTGTCATGTA- 33481
|| || || || ||||| |||||||| | | ||| || || ||| | | | | |
Sbjct 3739475 ATGCCCTCGACGGCAGCGAAGGCAATGATGCGCTCCCCGAAATTGGCCGATTTGGAGGAG 3739416
Query 33482 -TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540
|||| | ||||| || ||||| || ||| ||||| || || ||||| ||
Sbjct 3739415 ATCCAGGAAAGGGCCCAGTCCGCCTTGCGCTTCACAGCCGGCATTGTCTCGATGGCGTTG 3739356
Query 33541 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33600
|| || |||| | || ||| | ||||| ||||||| | ||| ||||||
Sbjct 3739355 AACAGGTAGTCCCGCTGATGCGGATCCCGGATGTAAGTGTCGATCAGCACACTGTACATT 3739296
Query 33601 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33660
||||| || | ||| || ||||| || || || || ||||| || | |||||| || |||
Sbjct 3739295 TCCGAGTGCACGTTCTCCATGGCGATTTGGAAGCCATAGAAGCACCGAGCCTCCGTGATC 3739236
Query 33661 TGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33720
|| || || || || || ||| ||| || || ||||| || || || || |||
Sbjct 3739235 TGCACCTCCTGACTGAAGCGCTCCACCAGGTTCTCGTTCACGATGCCATCGGATGCGGCA 3739176
Query 33721 AAAAACGCCA 33730
|| || ||||
Sbjct 3739175 AAGAAGGCCA 3739166
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622879610228800
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