Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1 244 3e-59 >seq1 Length=22559587 Score = 244 bits (270), Expect = 3e-59 Identities = 1116/1747 (64%), Gaps = 61/1747 (3%) Strand=Plus/Minus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 |||| || || ||||| |||||||| ||||| || || || || |||||| | |||| Sbjct 20043359 ATTGCAGAGCGTCCGCAACATATGTTGATGCGCGTGGCGATCGGAATCCATGGGGAGGAT 20043300 Query 363502 GTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACG 363561 | ||||| || | ||||| ||||| || | | || |||||||| || || Sbjct 20043299 ATAGATGCGGCCGTGGAAACTTATAATCTCTTGTCGGAGCGATACTTCACGCATGCGTCG 20043240 Query 363562 CCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAA 363621 |||||| | | |||| || | || ||| |||| |||||||| || | | Sbjct 20043239 CCAACACTTTTTGCCGCTGCCACAAATCGCCCGCAGCTGTCGTCTTGCTTCCTCTTGACC 20043180 Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 |||| || ||| || |||||||| || ||| | | | | | ||||| | || || Sbjct 20043179 ATGACGGCCGACTCTATCGAGGGCATTTTTAAGTCCGTGGAACAGTGTGCCTTGATCTCG 20043120 Query 363682 AAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGCACAGAACAGTTACAT 363740 || || ||||| ||||| | | || |||| | || ||| || || | || Sbjct 20043119 AAATCGGCCGGCGGCATTGGACTTAACG-TCCATTGCATCCGGGCAAAGGGCACCTCGAT 20043061 Query 363741 TCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATA 363799 | |||| || | || | | || ||||| ||||||||||| | | || || ||||| Sbjct 20043060 TTGCGGAACGAATGGCACA-TCCAATGGCTTGGTTCCCATGTTGAGGGTCTTCAACAATG 20043002 Query 363800 CTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCG 363859 ||| | || || || || || || || ||||| || || ||||| || || || | Sbjct 20043001 TGGCGCGTTATGTGGATCAAGGAGGTGGCAAGCGTCCCGGTGCCTTTGCCATTTACCTGG 20042942 Query 363860 AGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGG 363919 |||| || | ||| | |||||||| || || || ||||||||| || || |||| Sbjct 20042941 AGCCCTGGCACTCGGATGTCTTTGAGTTCCTGGAACTTAAGAAAAACACCGGCAAGGAGG 20042882 Query 363920 AATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCG 363979 || || || || |||||||| || || || ||| | | || | ||||||||||||| Sbjct 20042881 AAAATCGGGCCCGCGATCTGTTTTACGCCCTGTGGATACCCGATCTCTTTATGAAGCGCG 20042822 Query 363980 TGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATG 364039 | ||||| | ||||||| || | |||||||| |||| || || ||| ||||| Sbjct 20042821 TCGAGGCCAATGGAGATTGGTCGCTAATGTGCCCACATAAATGCCCTGGGCTTCACGATG 20042762 Query 364040 TATGGGGTGACGACTATGTTGCTCTATACGAAAA---GTATG---AATCGGAGGGAAAGG 364093 | ||||| || || || |||||| ||||| ||| ||| | ||| Sbjct 20042761 TGTGGGGCGATGA------------ATTCGAAAAGTTGTATGAGAAATATGAGCAAGAGG 20042714 Query 364094 CTCGT---AAGACAA---TTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGA 364147 |||| || | || || || || || ||||||||||| || || | ||| Sbjct 20042713 GTCGTGCCAACAGAACTGTTAAGGCTCAATCCCTGTGGTTTGCCATTATTGAAGCACAGG 20042654 Query 364148 TTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGC 364207 | || || |||| ||||| ||||||| || ||| | |||||| | ||| |||||||| Sbjct 20042653 TCGAAACTGGAAACCCCTACATGTTGTTTAAGGATGCCTGCAACAGGAAGAGCAACCAGC 20042594 Query 364208 AGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTC 364267 || | | || || || || ||||| | || || || || | || || |||||| Sbjct 20042593 AGAATGTCGGCACCATCAAGTGTAGCAATTTGTGCACAGAAATCGTAGAGTATTCCGCTC 20042534 Query 364268 CCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA-----A 364322 | || |||| ||| || || ||| | || || ||||| || |||||| | Sbjct 20042533 CGGATGAGATTGCAGTTTGCAACTTGGCATCCATCGCCCTCAACATGTTTGTCACTCCCG 20042474 Query 364323 AGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCT 364382 ||| | || | || | || | ||| | || || ||| | | ||| ||||| Sbjct 20042473 AGAAG--ACATACGATTTCAAGAAACTTAAGGAAGTTACCAAGACGGTTACCAAGAATCT 20042416 Query 364383 CGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCG 364442 ||||| | ||||| | || | || || | || || ||| || || ||| || | Sbjct 20042415 TAACAAGATAATCGATATTAACTTCTACCCCCTGCCAGAGGCCAAGAAATCCAATTTGAG 20042356 Query 364443 TCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCA---A 364499 ||||| || | || | ||||| ||||| ||||||||| | |||| |||| Sbjct 20042355 GCATCGTCCCGTGGGCATCGGTGTCCAGGGATTCGCTGACGCCT---TGATTCTCATGCG 20042299 Query 364500 GATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTA 364559 | | | | ||| ||| || | | | ||| || |||| || ||||| || || Sbjct 20042298 GTTCCCCTATGAAAGTGATGAAGCCGGCCTCTTGAATCAGCAGATTTTCGAAACTATCTA 20042239 Query 364560 TTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTA 364619 | | ||| || || ||||| |||| | | | | || || || || Sbjct 20042238 CTACGGCGCTTTGGAAGCCAGTTGTGAACTGGCCCAGATCGAAGGTCCATATGAAACCTA 20042179 Query 364620 TGAGGGGTCCCCTCTTTCGC-AGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCAT 364678 |||||| ||| | | || | |||| | |||| || | ||| | |||| Sbjct 20042178 TGAGGGAAGCCC-CGTGAGCAAAGGAATTCTGCAGTACGACATGTGGGACAAAGAGCCAA 20042120 Query 364679 CTGTCCGATGGAACTGGGATACGCT-ACG--TTCCAACGTTAAGAAGCATGGTACTCGCA 364735 | || ||| ||||| | | || | | |||| | |||||||| ||| || | Sbjct 20042119 CGAACCTTTGGGACTGGCAGAAACTGAAGGAGTCCA---TCAAGAAGCACGGTGTCCGGA 20042063 Query 364736 ACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACG 364795 ||||||| | || || |||||||| ||||||||||| || || | || ||||||| Sbjct 20042062 ACTCCCTGTTGGTTGCTCCTATGCCCACTGCTTCTACTGCTCAAATTATGGGTAACAACG 20042003 Query 364796 AGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTC 364855 | | ||||| || | |||| ||| ||||| | | || ||||| || |||||||| | Sbjct 20042002 AATCATTCGAGCCTTACACAACGAATATTTATACCAGGCGAGTTCTGTCTGGAGAATTCC 20041943 Query 364856 CGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCA 364915 || ||||| | | | | | ||| || | || | | |||||| ||| | Sbjct 20041942 AAGTGGTTAACCATCATTTGTTAAGGGACCTAACGGAGCTGGACTTGTGGGACGACGATA 20041883 Query 364916 TGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGG--AT-TTCCAG 364972 |||||||| | ||||| || | || || | || || ||| ||| || |||| Sbjct 20041882 TGAAGAACCAAATCATTTCCAGCAGGGGCTCAATCCAAAATATT-GAGGCCATCCCCCAG 20041824 Query 364973 AAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCAT-GCGAACTCTCATTGAT 365031 ||| | | | | |||||||| || |||||||| || | | | || ||| | Sbjct 20041823 AAGGTTCG--CGATCTGTACAAAACTGTGTGGGAAATCTCAGTAAAGTCCACT-ATTAAG 20041767 Query 365032 ATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCA--TGA 365089 ||||| || ||||| ||||| ||||| |||||| |||||||| ||| ||||| || Sbjct 20041766 ATGGCCGCAGATCGAGGTGCGTTTATAGATCAGAGTCAGTCGTTCAAC--ATTCATGTGG 20041709 Query 365090 CTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTA 365149 | |||||| || || || ||||| ||||| || || || |||||| | ||||| | Sbjct 20041708 CAGAGCCAAACTACGGAAAACTTACTTCCATACACTTTTATTCCTGGAAAGCTGGTCTAA 20041649 Query 365150 AGACAGG 365156 | || || Sbjct 20041648 AAACTGG 20041642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303208650787760