Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq1 244 3e-59
>seq1
Length=22559587
Score = 244 bits (270), Expect = 3e-59
Identities = 1116/1747 (64%), Gaps = 61/1747 (3%)
Strand=Plus/Minus
Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501
|||| || || ||||| |||||||| ||||| || || || || |||||| | ||||
Sbjct 20043359 ATTGCAGAGCGTCCGCAACATATGTTGATGCGCGTGGCGATCGGAATCCATGGGGAGGAT 20043300
Query 363502 GTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACG 363561
| ||||| || | ||||| ||||| || | | || |||||||| || ||
Sbjct 20043299 ATAGATGCGGCCGTGGAAACTTATAATCTCTTGTCGGAGCGATACTTCACGCATGCGTCG 20043240
Query 363562 CCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAA 363621
|||||| | | |||| || | || ||| |||| |||||||| || | |
Sbjct 20043239 CCAACACTTTTTGCCGCTGCCACAAATCGCCCGCAGCTGTCGTCTTGCTTCCTCTTGACC 20043180
Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681
|||| || ||| || |||||||| || ||| | | | | | ||||| | || ||
Sbjct 20043179 ATGACGGCCGACTCTATCGAGGGCATTTTTAAGTCCGTGGAACAGTGTGCCTTGATCTCG 20043120
Query 363682 AAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGCACAGAACAGTTACAT 363740
|| || ||||| ||||| | | || |||| | || ||| || || | ||
Sbjct 20043119 AAATCGGCCGGCGGCATTGGACTTAACG-TCCATTGCATCCGGGCAAAGGGCACCTCGAT 20043061
Query 363741 TCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATA 363799
| |||| || | || | | || ||||| ||||||||||| | | || || |||||
Sbjct 20043060 TTGCGGAACGAATGGCACA-TCCAATGGCTTGGTTCCCATGTTGAGGGTCTTCAACAATG 20043002
Query 363800 CTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCG 363859
||| | || || || || || || || ||||| || || ||||| || || || |
Sbjct 20043001 TGGCGCGTTATGTGGATCAAGGAGGTGGCAAGCGTCCCGGTGCCTTTGCCATTTACCTGG 20042942
Query 363860 AGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGG 363919
|||| || | ||| | |||||||| || || || ||||||||| || || ||||
Sbjct 20042941 AGCCCTGGCACTCGGATGTCTTTGAGTTCCTGGAACTTAAGAAAAACACCGGCAAGGAGG 20042882
Query 363920 AATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCG 363979
|| || || || |||||||| || || || ||| | | || | |||||||||||||
Sbjct 20042881 AAAATCGGGCCCGCGATCTGTTTTACGCCCTGTGGATACCCGATCTCTTTATGAAGCGCG 20042822
Query 363980 TGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATG 364039
| ||||| | ||||||| || | |||||||| |||| || || ||| |||||
Sbjct 20042821 TCGAGGCCAATGGAGATTGGTCGCTAATGTGCCCACATAAATGCCCTGGGCTTCACGATG 20042762
Query 364040 TATGGGGTGACGACTATGTTGCTCTATACGAAAA---GTATG---AATCGGAGGGAAAGG 364093
| ||||| || || || |||||| ||||| ||| ||| | |||
Sbjct 20042761 TGTGGGGCGATGA------------ATTCGAAAAGTTGTATGAGAAATATGAGCAAGAGG 20042714
Query 364094 CTCGT---AAGACAA---TTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGA 364147
|||| || | || || || || || ||||||||||| || || | |||
Sbjct 20042713 GTCGTGCCAACAGAACTGTTAAGGCTCAATCCCTGTGGTTTGCCATTATTGAAGCACAGG 20042654
Query 364148 TTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGC 364207
| || || |||| ||||| ||||||| || ||| | |||||| | ||| ||||||||
Sbjct 20042653 TCGAAACTGGAAACCCCTACATGTTGTTTAAGGATGCCTGCAACAGGAAGAGCAACCAGC 20042594
Query 364208 AGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTC 364267
|| | | || || || || ||||| | || || || || | || || ||||||
Sbjct 20042593 AGAATGTCGGCACCATCAAGTGTAGCAATTTGTGCACAGAAATCGTAGAGTATTCCGCTC 20042534
Query 364268 CCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA-----A 364322
| || |||| ||| || || ||| | || || ||||| || |||||| |
Sbjct 20042533 CGGATGAGATTGCAGTTTGCAACTTGGCATCCATCGCCCTCAACATGTTTGTCACTCCCG 20042474
Query 364323 AGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCT 364382
||| | || | || | || | ||| | || || ||| | | ||| |||||
Sbjct 20042473 AGAAG--ACATACGATTTCAAGAAACTTAAGGAAGTTACCAAGACGGTTACCAAGAATCT 20042416
Query 364383 CGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCG 364442
||||| | ||||| | || | || || | || || ||| || || ||| || |
Sbjct 20042415 TAACAAGATAATCGATATTAACTTCTACCCCCTGCCAGAGGCCAAGAAATCCAATTTGAG 20042356
Query 364443 TCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCA---A 364499
||||| || | || | ||||| ||||| ||||||||| | |||| ||||
Sbjct 20042355 GCATCGTCCCGTGGGCATCGGTGTCCAGGGATTCGCTGACGCCT---TGATTCTCATGCG 20042299
Query 364500 GATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTA 364559
| | | | ||| ||| || | | | ||| || |||| || ||||| || ||
Sbjct 20042298 GTTCCCCTATGAAAGTGATGAAGCCGGCCTCTTGAATCAGCAGATTTTCGAAACTATCTA 20042239
Query 364560 TTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTA 364619
| | ||| || || ||||| |||| | | | | || || || ||
Sbjct 20042238 CTACGGCGCTTTGGAAGCCAGTTGTGAACTGGCCCAGATCGAAGGTCCATATGAAACCTA 20042179
Query 364620 TGAGGGGTCCCCTCTTTCGC-AGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCAT 364678
|||||| ||| | | || | |||| | |||| || | ||| | ||||
Sbjct 20042178 TGAGGGAAGCCC-CGTGAGCAAAGGAATTCTGCAGTACGACATGTGGGACAAAGAGCCAA 20042120
Query 364679 CTGTCCGATGGAACTGGGATACGCT-ACG--TTCCAACGTTAAGAAGCATGGTACTCGCA 364735
| || ||| ||||| | | || | | |||| | |||||||| ||| || |
Sbjct 20042119 CGAACCTTTGGGACTGGCAGAAACTGAAGGAGTCCA---TCAAGAAGCACGGTGTCCGGA 20042063
Query 364736 ACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACG 364795
||||||| | || || |||||||| ||||||||||| || || | || |||||||
Sbjct 20042062 ACTCCCTGTTGGTTGCTCCTATGCCCACTGCTTCTACTGCTCAAATTATGGGTAACAACG 20042003
Query 364796 AGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTC 364855
| | ||||| || | |||| ||| ||||| | | || ||||| || |||||||| |
Sbjct 20042002 AATCATTCGAGCCTTACACAACGAATATTTATACCAGGCGAGTTCTGTCTGGAGAATTCC 20041943
Query 364856 CGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCA 364915
|| ||||| | | | | | ||| || | || | | |||||| ||| |
Sbjct 20041942 AAGTGGTTAACCATCATTTGTTAAGGGACCTAACGGAGCTGGACTTGTGGGACGACGATA 20041883
Query 364916 TGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGG--AT-TTCCAG 364972
|||||||| | ||||| || | || || | || || ||| ||| || ||||
Sbjct 20041882 TGAAGAACCAAATCATTTCCAGCAGGGGCTCAATCCAAAATATT-GAGGCCATCCCCCAG 20041824
Query 364973 AAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCAT-GCGAACTCTCATTGAT 365031
||| | | | | |||||||| || |||||||| || | | | || ||| |
Sbjct 20041823 AAGGTTCG--CGATCTGTACAAAACTGTGTGGGAAATCTCAGTAAAGTCCACT-ATTAAG 20041767
Query 365032 ATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCA--TGA 365089
||||| || ||||| ||||| ||||| |||||| |||||||| ||| ||||| ||
Sbjct 20041766 ATGGCCGCAGATCGAGGTGCGTTTATAGATCAGAGTCAGTCGTTCAAC--ATTCATGTGG 20041709
Query 365090 CTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTA 365149
| |||||| || || || ||||| ||||| || || || |||||| | ||||| |
Sbjct 20041708 CAGAGCCAAACTACGGAAAACTTACTTCCATACACTTTTATTCCTGGAAAGCTGGTCTAA 20041649
Query 365150 AGACAGG 365156
| || ||
Sbjct 20041648 AAACTGG 20041642
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303208650787760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |