Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_008348.1 Length=168041 Score E Sequences producing significant alignments: (Bits) Value seq5054 91.5 2e-13 >seq5054 Length=194204 Score = 91.5 bits (100), Expect = 2e-13 Identities = 110/147 (75%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 38445 TGGCCCAAGAGCATGAAGCAGACGCCGCAACAGTTGGCCGAGGCCGGCTTCTACTATTCG 38504 ||||| | || | | ||||||| ||| || ||| |||||||||| || |||| ||| || Sbjct 84670 TGGCCGAGGAACCTAAAGCAGAAGCCCCACCAGCTGGCCGAGGCGGGTTTCTTCTACACG 84611 Query 38505 GGCACCGGAGACCAGGTCAAATGTTTCTTTTGCGGCGGCGGCCTTAAGGACTGGGA-GCC 38563 ||| ||||| | ||| || ||| ||||||||| || || ||||||||||| | | Sbjct 84610 GGCGTTGGAGATCGCGTCCGCTGCTTCAGTTGCGGCGGTGGTCTCAAGGACTGGGACGAC 84551 Query 38564 TGCGGACGATCCGTGGGCGCAGCACGC 38590 | ||||| || |||| ||||||||| Sbjct 84550 AAC-GACGAGCCCTGGGAGCAGCACGC 84525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537544870052800