Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1 123 5e-23 seq7574 91.5 3e-13 seq6924 91.5 3e-13 seq3976 91.5 3e-13 seq6416 89.7 1e-12 seq4563 89.7 1e-12 >seq1 Length=22559587 Score = 123 bits (136), Expect = 5e-23 Identities = 293/443 (66%), Gaps = 0/443 (0%) Strand=Plus/Plus Query 218563 GAGCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTT 218622 |||||||| |||||||| ||||||| ||| | |||||| ||||| ||| | | || Sbjct 4077113 GAGCGTTCCATTCCCAGTCTGGTGGACGGCTTGAAGCCAGGTCAGCGCAAGGTGATGTTC 4077172 Query 218623 GCCGCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTA 218682 || |||||| ||||| | || ||||||| || ||| | ||||||| || Sbjct 4077173 ACCTGCTTCAAGAGGAACGACAAGCGTGAGGTTAAGGTGGCCCAGCTGTCTGGTTCCGTC 4077232 Query 218683 TCCGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATG 218742 |||| || || | ||| || ||||||||| |||||| |||| || || Sbjct 4077233 GCCGAGATGTCGGCCTATCACCACGGTGAGGTTTCGCTGCAGATGACCATCGTTAATCTG 4077292 Query 218743 GCACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGT 218802 || ||| ||||||||||| || || || || | ||| || ||||||||| ||| Sbjct 4077293 GCCCAGAACTATGTGGGCGCAAATAATATAAATCTCCTGGAGCCACGCGGTCAGTTCGGT 4077352 Query 218803 TCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCG 218862 |||| | ||| || |||||| | || ||| | ||||| || || | |||| Sbjct 4077353 ACTCGCTTGACGGGCGGCAAGGATTGCGCCAGTGCTCGTTATATTTTCACTTTGATGTCT 4077412 Query 218863 CCCGTGACGCGCCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAGGAC 218922 ||| |||| || | | | | ||| || ||| ||| || | || | | |||| Sbjct 4077413 CCCTTGACCCGACTCATCTACCATCCCTTGGACGATCCGCTGCTGGACTACCAGGTGGAC 4077472 Query 218923 GATGGTTCTTCGATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTTGCTCGTAAAT 218982 ||||| |||||||||| ||||||| |||| |||||| | |||| ||||| Sbjct 4077473 GATGGCCAGAAGATTGAGCCCCAGTGGTACCTGCCCATCATTCCGATGGTGCTGGTAAAC 4077532 Query 218983 GGTGCCAATGGTATCGGGACAGG 219005 ||||| | || ||||| || || Sbjct 4077533 GGTGCTGAGGGCATCGGAACTGG 4077555 >seq7574 Length=3157482 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||| |||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 129117 ATTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 129176 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 129177 AGCCCCACGTTGGGC 129191 Score = 91.5 bits (100), Expect = 3e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||| |||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 131777 ATTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 131836 Query 142561 AGCCCCACATCGGGCAGA 142578 |||||||| | |||| || Sbjct 131837 AGCCCCACGTTGGGCGGA 131854 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 141374 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 141315 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 141314 CCCCACGTTGGGC 141302 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 95925 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 95866 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 95865 CCCACGTTGGGC 95854 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 869072 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 869131 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 869132 CCCACGTTGGGC 869143 >seq6924 Length=403623 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||| |||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 308901 ATTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 308960 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 308961 AGCCCCACGTTGGGC 308975 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 308343 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 308284 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 308283 CCCACGTTGGGC 308272 >seq3976 Length=747349 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 543182 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 543123 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 543122 CCCCACGTTGGGC 543110 >seq6416 Length=4379031 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 1865560 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1865501 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 1865500 CCCACGTTGGGC 1865489 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 1866443 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1866384 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 1866383 CCCACGTTGGGC 1866372 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 1866935 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1866876 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 1866875 CCCACGTTGGGC 1866864 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 1868216 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1868157 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 1868156 CCCACGTTGGGC 1868145 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 1869195 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1869136 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 1869135 CCCACGTTGGGC 1869124 >seq4563 Length=14502029 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142052 TGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111 |||| || ||||||| ||| ||||||||||||||||||||||||||| |||||||||| Sbjct 4115176 TGTCCCTTTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGCGGGTTCGAT 4115235 Query 142112 CCCCGCCAGAGA 142123 |||||| || || Sbjct 4115236 CCCCGCAAGGGA 4115247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027722491699880