Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq1 167 4e-36
seq3325 163 5e-35
seq4812 154 3e-32
seq4563 84.2 4e-11
>seq1
Length=22559587
Score = 167 bits (184), Expect = 4e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||||| |||||||| | |||||||| || || |||||||| || |||
Sbjct 20155547 CCACCACGCAGGCGCAGCACCAAGTGCAAAGTGGACTCCTTCTGAATGTTATAGTCAGAG 20155488
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | |||||| || ||||| || || | || || || || |||
Sbjct 20155487 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGA 20155428
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| ||||| ||||| |||||||| || ||||| ||||| || || | | ||| ||
Sbjct 20155427 ATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCCGAAGGTTCGACC 20155368
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||| || |||||||||||||| ||||| ||||||||
Sbjct 20155367 TCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 20155321
Score = 158 bits (174), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| ||||| | |||| ||| || || ||||| || |||||||| || |||||
Sbjct 1136945 CCACCGCGCAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 1137004
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| |||||||| || || | || || || || ||
Sbjct 1137005 AGGGTTCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGG 1137064
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| ||||| || |||||||||||| | | || ||
Sbjct 1137065 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCCGAAGGCTCCACC 1137124
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||||||||||||| || || |||||||| || ||||| || |||||
Sbjct 1137125 TCCAAGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 1137171
Score = 100 bits (110), Expect = 5e-16
Identities = 380/605 (63%), Gaps = 66/605 (11%)
Strand=Plus/Minus
Query 268246 CTGGAGCATTTTCCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGC 268305
||| ||||| ||||||| || || ||||| || | ||||| ||||| ||||| ||||
Sbjct 3531740 CTGCAGCATCATCCACATGGCCTCCACATAATCGCTGGCATGTCCCCAGTCGCGTTTTGA 3531681
Query 268306 GTCCATGTTCCCGAGGAACAGGCATTTC---TGCTTGCC---GAGCTTCACGCGTGCAAG 268359
||||| || || || | | | | | |||||| || ||| | || |
Sbjct 3531680 GTCCAGATTGCCCAGCTCGAAGTACTCCATTTGCTTGTGATAGATCTTGGC-----CACG 3531626
Query 268360 ACCGCGAGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAA 268419
| ||| |||||||||| |||||||| |||| ||||| | || ||||| ||||||||
Sbjct 3531625 -CTGCGGGTGATTTTTCTCGTCACGAAGTTCTCCCCACGCCGCGGACTCTCATGGTTGAA 3531567
Query 268420 GAGGATGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTA 268479
|||||||| ||||| ||| ||||| || ||||| |||||||| | ||| ||||| |
Sbjct 3531566 TAGGATGCCATTGCATGCGTACATGTTGTAGGCCTCGCGGTAGTTGATGACGATCCAGAA 3531507
Query 268480 TGCAAACATCTTTGC--------------------------------------------- 268494
| |||| || ||
Sbjct 3531506 GCCGTACATTTTGGCGCAGGCTAAGGTCAGATGATAGTGTTATAAGTAAAGGAATTTGGA 3531447
Query 268495 -AACTGCGT------ACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTT-TGAGGGATT 268546
|||||| | | || || | ||||| |||||||||| || || || || || |
Sbjct 3531446 GAACTGCCTTACCATATGGCGACCTTGGATAGAAGGGCGTC-TGTTCGTTCTGTGGCGTC 3531388
Query 268547 TCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCG 268606
|| ||||||||| | ||||| || || || |||||||||||||| || || ||
Sbjct 3531387 TCCACCACTTTGCCATAAAGCTCCGAAGTGGAGGCTTGGTAGAACTTCACCGTCTTCTCC 3531328
Query 268607 AGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCT 268666
| || || | || || || || || | || | || |||| | ||||||| || ||
Sbjct 3531327 ATGCCACAAGTGCGAATGGCGTCCAGGATGCGCAACGTGCCCACGGCATCCACCTCGGCC 3531268
Query 268667 GTATACTCCGGCATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAACC 268726
|| ||||| | ||||| || |||| ||||||| || || |||| || |||| |
Sbjct 3531267 GTGTACTCACTGAGGTCGAAGGAGACCTTGACATGGGATTGTGCCGCCAGATTGTAAATC 3531208
Query 268727 TCATCCGGTTTGACCTGCTGCACGATCTTCACGAGGTTCGTTGAGTCGGTGAGGTCTCCG 268786
|| || || ||| | | |||||| || ||| | | ||| || | || |||
Sbjct 3531207 TCCGTGGGCTTCACCATATTGATGATCTTAACCAGGCTGCTGCTGTCCGTCATATCGCCG 3531148
Query 268787 TAGTG 268791
|||||
Sbjct 3531147 TAGTG 3531143
>seq3325
Length=21082
Score = 163 bits (180), Expect = 5e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||||||| | || ||||| || || ||||| ||||||||
Sbjct 20297 CCACCACGCAGACGGAGAACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAATCGGAC 20238
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| |||||||| ||||| | || || || || ||
Sbjct 20237 AGGGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCTGGGGGG 20178
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||||||||| ||||| ||||||||| || |||||||| | | ||| ||
Sbjct 20177 ATGCCCTCCTTGTCTTGGATCTTAGCCTTGACGTTTTCAATGGTGTCCGAAGGTTCCACC 20118
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|||| ||||||||| || || || || || ||||| || |||||||||
Sbjct 20117 TCCAGGGTGATGGTCTTGCCAGTAAGAGTTTTGACAAAGATCTGCATT 20070
Score = 158 bits (174), Expect = 2e-33
Identities = 173/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
|||| ||||| || || | |||||||| || |||||||| || |||||||| ||||| |
Sbjct 19843 TTCCACCGCGTAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAG 19784
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
| | || | ||||| || | |||||| |||||||| ||||| | || || || || |
Sbjct 19783 ACAAAGTGCGACCATCCTCCAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCTGGGG 19724
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412
| || || |||||||| || ||||| ||||| || ||||||||| || | | || |
Sbjct 19723 GGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTATCAGAAGGCTCAA 19664
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|||| | ||||||||||| || || | |||||||| || |||||||||
Sbjct 19663 CTTCAAGAGTGATGGTTTTGCCGGTCAAAGTCTTGACAAAGATCTGCATT 19614
Score = 158 bits (174), Expect = 2e-33
Identities = 173/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
|||| ||||| || || | |||||||| || |||||||| || |||||||| ||||| |
Sbjct 20071 TTCCACCGCGTAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAG 20012
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
| | || | ||||| || | |||||| |||||||| ||||| | || || || || |
Sbjct 20011 ACAAAGTGCGACCATCCTCCAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCTGGGG 19952
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412
| || || |||||||| || ||||| ||||| || ||||||||| || | | || |
Sbjct 19951 GGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTATCAGAAGGCTCAA 19892
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|||| | ||||||||||| || || | |||||||| || |||||||||
Sbjct 19891 CTTCAAGAGTGATGGTTTTGCCGGTCAAAGTCTTGACAAAGATCTGCATT 19842
Score = 145 bits (160), Expect = 1e-29
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | ||||| || | || || || || |||||||| ||||||||
Sbjct 20753 CCACCACGCAGACGGAGAACCAAATGCAAAGTCGATTCCTTCTGGATGTTGTAATCGGAC 20694
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | || || |||||||| || | || || || || || ||
Sbjct 20693 AGGGTGCGTCCGTCCTCCAGTTGTTTGCCGGCGAAGATCAATCGCTGCTGATCTGGGGGG 20634
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| ||||| || || |||||||||| || || |||
Sbjct 20633 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTTTCAATGGTGTCTGATGGCTCAACT 20574
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|||||||||||||| || || || || |||||||| || |||||||||
Sbjct 20573 TCCAAGGTGATGGTCTTGCCAGTAAGTGTCTTGACAAAGATCTGCATT 20526
Score = 143 bits (158), Expect = 5e-29
Identities = 169/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
|||| ||||| || || | |||||||| || || ||||| || |||||||| || ||||
Sbjct 20527 TTCCACCGCGGAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGG 20468
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
| || || | || || || | || || |||||||| || || | || || || || |
Sbjct 20467 ACAGGGTGCGTCCGTCCTCCAGTTGTTTGCCGGCGAAGATAAGACGCTGCTGATCTGGGG 20408
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412
| ||||| |||||||| || || || ||||| ||| || || ||||| | | ||||
Sbjct 20407 GGATGCCCTCCTTGTCCTGGATTTTAGCCTTTACGTTTTCAATAGTGTCCGAAGGCTCTA 20348
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| | |||||||| ||||| || | ||||||||||| ||||||||
Sbjct 20347 CTTCAAGAGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 20299
>seq4812
Length=908733
Score = 154 bits (170), Expect = 3e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | ||||| || | || ||||| || || ||||| ||||||||
Sbjct 620059 CCACCACGCAGACGGAGAACCAAATGCAAGGTCGACTCCTTCTGAATGTTGTAATCGGAC 620118
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | ||||| || | |||||| |||||||| ||||| | || || || || |||
Sbjct 620119 AAAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCTGGGGGA 620178
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||||||||| ||||| || |||||| || |||||||||| | || ||
Sbjct 620179 ATACCCTCCTTGTCTTGGATCTTGGCTTTGACGTTTTCAATGGTGTCTGAAGGCTCCACC 620238
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|||| ||||||||| || || || || || |||||||| |||||||||
Sbjct 620239 TCCAGGGTGATGGTCTTGCCAGTAAGAGTTTTGACGAAGATCTGCATT 620286
Score = 140 bits (154), Expect = 6e-28
Identities = 148/195 (76%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 68268 GACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCG 68327
||||| || ||||||||||||||||| | || | || || || | |||||| ||||||
Sbjct 620500 GACTCCTTCTGGATGTTATAATCGGACAAAGTGCGACCGTCCTCAAGCTGCTTTCCGGCG 620559
Query 68328 AATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACG 68387
|| || || | || || || || ||||| || ||||||||||| || || ||||| |||
Sbjct 620560 AAGATAAGACGCTGCTGATCTGGGGGAATACCCTCCTTGTCTTGGATTTTGGCCTTTACG 620619
Query 68388 GCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTG 68447
|| |||||||| | | || || |||| ||||||||| || || || || || |||
Sbjct 620620 TTTTCAATGGTGTCCGAAGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTAAGAGTTTTG 620679
Query 68448 ACGAATATCTGCATT 68462
||||| |||||||||
Sbjct 620680 ACGAAGATCTGCATT 620694
Score = 138 bits (152), Expect = 2e-27
Identities = 159/214 (74%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
|||| ||||| || || | ||||||||| || || ||||| || |||||||| || ||||
Sbjct 620285 TTCCACCGCGCAGACGGAGTACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGG 620344
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
| || || | || || || | || || |||||||| || || | || || || || |
Sbjct 620345 ACAGGGTGCGTCCGTCCTCCAGTTGTTTGCCGGCGAAGATAAGACGCTGCTGATCTGGGG 620404
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412
|||| || ||||||||||| ||||| ||||||||| || |||||||| | | || |
Sbjct 620405 GAATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTTTTCAATGGTGTCCGAAGGCTCCA 620464
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTT 68446
| |||| ||||||||| || || || || || ||
Sbjct 620465 CCTCCAGGGTGATGGTCTTGCCAGTAAGAGTTTT 620498
Score = 131 bits (144), Expect = 3e-25
Identities = 149/200 (75%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 68262 AGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTC 68321
|| || ||||| || |||||||| || || || || || | || || || | |||||
Sbjct 619858 AGGGTCGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCGTCCTCCAGTTGCTTG 619917
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
|||||||| ||||| | || ||||| || ||||| || ||||||||||| ||||| |||
Sbjct 619918 CCGGCGAAGATGAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCTTGGATCTTGGCC 619977
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|||||| || ||||| || | | || ||||||| || ||||| ||||| || |
Sbjct 619978 TTGACGTTTTCAATGGTATCAGAAGGCTCGACTTCCAGAGTAATGGTCTTTCCGGTCAAA 620037
Query 68442 GTCTTGACGAATATCTGCAT 68461
||||| ||||| || |||||
Sbjct 620038 GTCTTCACGAAGATTTGCAT 620057
>seq4563
Length=14502029
Score = 84.2 bits (92), Expect = 4e-11
Identities = 110/152 (72%), Gaps = 3/152 (2%)
Strand=Plus/Minus
Query 10622 CAGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAA 10681
||||||||| |||| ||||||||| | ||||||||| | || | |||| ||||||
Sbjct 3739209 CAGGTTCTCGTTCACGATGCCATCGGATGCGGCAAAGAAGGCCAGCACGTGCGAGATGAA 3739150
Query 10682 GTGGCGCTCATCATCGTTCAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGAC 10741
||| || || || || ||||| | ||||||| || |||| | || | ||
Sbjct 3739149 GTGACGTTCGTCGTCCTTCAGGCGGT---GCCAGTCGGTCAGGTCCTTGGACAGATCCAC 3739093
Query 10742 CTCCTCCACGGTCCAGAAAGTGGCAACGGCCT 10773
|||||||||||||||||||| ||| | ||||
Sbjct 3739092 CTCCTCCACGGTCCAGAAAGAGGCCTCAGCCT 3739061
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921522403969600
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