Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq5978 95.1 3e-16 >seq5978 Length=4749261 Score = 95.1 bits (104), Expect = 3e-16 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 3334 CCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCG 3393 |||||| || |||||||| | |||| ||||| || |||||||||||||| || Sbjct 2304968 CCCATGGCCCGGGTCTTTCCGAAGGTCACCAAGTGTACGTTCCACAAATACGGTCCCTCC 2305027 Query 3394 GGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAG 3453 ||| || | || | ||| || || ||| | || || |||| | |||||||||||| Sbjct 2305028 GGCAGTGTGCAGAAGTTCGACGGTCTGTGCGTGCTGCCCCTGAACATTGTCAACGAGAAG 2305087 Query 3454 ATCTACATTTTCCTCTGGTTCTGGTTC 3480 |||||| | ||||| |||||||||||| Sbjct 2305088 ATCTACGTGTTCCTGTGGTTCTGGTTC 2305114 Score = 77.0 bits (84), Expect = 8e-11 Identities = 86/115 (75%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 3367 TGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATC 3426 || || || ||||| |||||| | || || || || | || |||| ||||||||| Sbjct 2275639 TGCACCTTCCACAAGTACGGTGCCTCCGGTTCGCTCCAGAAGCACGACTCCCTCTGCATC 2275580 Query 3427 CTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTCT 3481 || ||| |||| | || |||||||||| |||| | ||| | ||||||||||||| Sbjct 2275579 CTGCCGCTGAACATTGTGAACGAGAAGACCTACGTGTTCATTTGGTTCTGGTTCT 2275525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12478815180000