Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq4563 311 2e-79
seq1 233 4e-56
>seq4563
Length=14502029
Score = 311 bits (344), Expect = 2e-79
Identities = 570/821 (69%), Gaps = 23/821 (3%)
Strand=Plus/Plus
Query 42335 CTGGACCGCCGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA 42394
|||||||| |||||| | || ||| |||||||| | ||| |||| ||| | ||||
Sbjct 3739077 CTGGACCGTGGAGGAGGTGGATCTGTCCAAGGACCTGACCGACTGG----CACCGCCTGA 3739132
Query 42395 -GAACGA--AAAGTTT-TTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCA 42450
| |||| || || ||| || || | ||||||||||| ||||| || || ||||
Sbjct 3739133 AGGACGACGAACGTCACTTCATCTCGCACGTGCTGGCCTTCTTTGCCGCATCCGATGGCA 3739192
Query 42451 TAGTCAATGAGAACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCT 42510
| || || |||||||||| | |||| | ||||||||| | ||||| || |
Sbjct 3739193 TCGTGAACGAGAACCTGGTGGAGCGCTTCAGTCAGGAGGTGCAGATCACGGAGGCTCGGT 3739252
Query 42511 GCTTCTACGGCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGC 42570
||||||| |||||||| || ||||| |||||||||||||| || ||||| |||
Sbjct 3739253 GCTTCTATGGCTTCCAAATCGCCATGGAGAACGTGCACTCGGAAATGTACAGTGTGCTGA 3739312
Query 42571 TCAACACGTACATCCTGGATCC-CGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACG 42629
|| |||| ||||||| |||||| | || |||| || |||||||| ||||| |||||
Sbjct 3739313 TCGACACTTACATCCGGGATCCGCATC-AGCGGGACTACCTGTTCAACGCCATCGAGACA 3739371
Query 42630 ATGCC--CTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGA-- 42685
||||| ||| | ||| |||||||||||||| || ||||||| ||| |
Sbjct 3739372 ATGCCGGCTG--TGAAGCGCAAGGCGGACTGGGCCCTTTCCTGGATC--TCCTCCAAATC 3739427
Query 42686 CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGG 42745
|| | ||||| ||| | | | ||||| | ||||||||||||||||||||| ||
Sbjct 3739428 GGCCAATTTCGGGGAGCGCATCATTGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGCGG 3739487
Query 42746 CGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCT 42804
| ||| |||||||| |||||||| ||| || ||| | |||||| ||||| |||||||
Sbjct 3739488 CAGCTTTGCCTCCATTTTCTGGCTGAAGAAGCGCGGTCT-GATGCCGGGACTGACCTTCT 3739546
Query 42805 CGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCT 42864
| ||||| || ||| | | |||||||| ||||| | ||||||||| || |||||
Sbjct 3739547 CCAACGAGCTTATCTCCCGCGACGAGGGCTTGCATTGCGACTTTGCCGTGCTGATGTTCC 3739606
Query 42865 CGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCG 42924
| ||| | ||| ||| | ||||| || | |||||| || || |
Sbjct 3739607 AG---CACTTGGTGCAGCGACCCAGGCGCGAGCGCATCATCGAGATCATCCGCGATGCGG 3739663
Query 42925 TGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACC 42984
||| || ||| |||||||| | || | | ||||||| ||| |||||||||||
Sbjct 3739664 TGGCCATTGAGCAGGAGTTCTTAACCGATGCCTTGCCCGTAAACCTCATCGGCATGAACT 3739723
Query 42985 ACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTC 43044
||| || |||| ||||||| | | ||| || |||| || ||| || || |
Sbjct 3739724 GCGATCTTATGTCGCAGTACATTGAATTCGTGGCGGACCGACTGCTGGTGGAGTTGAGCG 3739783
Query 43045 TCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGG 43104
| || ||||||| || | |||||| |||| ||||||| |||||| |||| |
Sbjct 3739784 TTGGCAAAATCTACAATACCAAGAACCCCTTTAACTTCATGGAGATGATCTCGCTGGACG 3739843
Query 43105 GCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145
| ||||| ||||| || |||||| || | ||| ||||||
Sbjct 3739844 GAAAGACGAACTTCTTTGAGAAGAAGGTGGGCGAGTACCAG 3739884
>seq1
Length=22559587
Score = 233 bits (258), Expect = 4e-56
Identities = 711/1089 (65%), Gaps = 36/1089 (3%)
Strand=Plus/Plus
Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGC-- 244147
||| ||||| || || ||||| ||||| || || | ||||| | | | || |
Sbjct 20041932 GTTAACCACTTGGAATTCTCCAGACAGAACTCGCC--TGGTATAAATATTCGTTGTGTAA 20041989
Query 244148 GGCTCGA-TGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGA 244206
||||||| || | || |||| |||| || || || || ||||| ||||| || |
Sbjct 20041990 GGCTCGAATGAT-TCGTTGTTACCCATAATTTGAGCAGTAGAAGCAGTGGGCATAGGAGC 20042048
Query 244207 CACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTC--TGAGCTCGTTCCAG 244264
|||| ||| ||||| || |||||| ||| |||| || || | || | | ||||
Sbjct 20042049 AACCAACAGGGAGTTCCGGACACCGTGCTTCTTGATG--GACTCCTTCAGTTTCTGCCAG 20042106
Query 244265 TCCCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCC 244324
||||| | | || | || |||| |||||||||| ||||||| | ||
Sbjct 20042107 TCCCAAAGGTTCGTTGGCTC------TTTGT---CCCACATGTCGTACTGCAGAATTCCT 20042157
Query 244325 TTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAG 244384
||||| |||||||| ||||| ||||| || ||||| ||| ||||||||| | |||
Sbjct 20042158 TTGCTCACGGGGCTTCCCTCATAGGTTTCATATGGACCTTCGATCTGGGCCAGTTCACAA 20042217
Query 244385 CTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCC 244444
|| | || | ||| |||||||||| || ||||| ||| || |||| | || |||
Sbjct 20042218 CTGGCTTCCAAAGCGCCGTAGTAGATAGTTTCGAAAATCTGCTGATTCAAGAGGCCGGCT 20042277
Query 244445 TTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCG 244504
| | | |||||| | ||| | || ||| |||| || | |||||| || |||
Sbjct 20042278 TCATCACTTTCATAGGGGAACCGCATGAGAATCAAGGCGTCAGCGAATCCCTGGACACCG 20042337
Query 244505 ATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTG 244564
||||| | ||| | || | | ||||| | |||| || |||| |||||| |||||
Sbjct 20042338 ATGCCCACGGGACGATGCCTCAAATTGGATTTCTTGGCCTCTGGCAGGGGGTAGAAGTTA 20042397
Query 244565 CCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCT-G 244623
||||| | |||||| || || ||| | | | | || || || || |
Sbjct 20042398 ATATCGATTATCTTGTTAAGATTCTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTTG 20042457
Query 244624 AAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGAC 244683
||| ||||| | | ||||| || |||| ||||| |||||||||||
Sbjct 20042458 AAA-------TCGTATGTCTTCTCGG-GA--GTGA------CAAACATGTTGAGGGCGAT 20042501
Query 244684 GCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCA 244743
| |||| |||||| || || | ||| |||| || |||| || || || |||||
Sbjct 20042502 GGATGCCAAGTTGCAAACTGCAATCTCATCCGGAGCGGAATACTCTACGATTTCTGTGCA 20042561
Query 244744 GAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTC 244803
| || || |||||||||||||| | | ||| || ||| ||| ||||||||| ||
Sbjct 20042562 CAAATTGCTACACTTGATGGTGCCGACATTCTGCTGGTTGCTCTTCCTGTTGCAGGCATC 20042621
Query 244804 CTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAG 244863
||| | | |||| |||| || || |||| ||| || | | | | ||| ||
Sbjct 20042622 CTTAAACAACATGTAGGGGTTTCCAGTTTCGACCTGTGCTTCAATAATGGCAAACCACAG 20042681
Query 244864 GTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGC 244923
| |||||| || || ||| || |||||| ||| || ||||
Sbjct 20042682 GGATTGAGCCTTAACAGTTCTGTTGGCACGACCCTCTTGCTCATATTTCTCATACAACTT 20042741
Query 244924 CTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACT 244983
||||| || |||||| || |||| || || ||||| |||||||| ||
Sbjct 20042742 TTCGAATTCATCGCCCCACACATCGTGAAGCCCAGGGCATTTATGTGGGCACATTAGCGA 20042801
Query 244984 CCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAA 245043
||| || || | ||| ||| | || ||| ||||| ||||| ||||| ||||| | ||
Sbjct 20042802 CCAATCTCCATTGGCCTCGACGCGCTTCATAAAGAGATCGGGTATCCACAGGGCGTAAAA 20042861
Query 245044 GAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAA 245103
|| || | || || | || ||| ||| ||||| ||| | || |||| || |||||
Sbjct 20042862 CAGATCGCGGGCCCGATTTTCCTCCTTGCCGGTGTTTTTCTTAAGTTCCAGGAACTCAAA 20042921
Query 245104 GACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCC 245163
||| || |||||||||||||| ||| | || | ||| ||||| |||||| |||||
Sbjct 20042922 GACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTTGCCACCTCC 20042981
Query 245164 CTGGTCCAC 245172
|| |||||
Sbjct 20042982 TTGATCCAC 20042990
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944236739196800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |