Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1 156 4e-33 >seq1 Length=22559587 Score = 156 bits (172), Expect = 4e-33 Identities = 423/644 (66%), Gaps = 20/644 (3%) Strand=Plus/Minus Query 20135 GGAAAGGGACGTGGAGTGCGCGTCAGCTGCAGCCGTAGTGGCTCTATATGCGTTTTGTAG 20194 || |||||||| || |||||| ||||||| | || ||||| | ||| | |||| Sbjct 6128290 GGGAAGGGACGCGGCGTGCGCTCCAGCTGCTCCTTCAGCGGCTCCACATGGTTCAGGTAG 6128231 Query 20195 ATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCA 20254 ||||| | || |||| ||||| | ||| || ||||| | ||||| || ||||| || Sbjct 6128230 ATGTGCGTGTCGCCCATGGTGTGCACAAAGTCTCCGGGCTTCAGACCCGTCACATGGGCG 6128171 Query 20255 AGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCT 20314 | ||| | || | |||| ||| ||| ||||| || || || |||| |||||||| Sbjct 6128170 ATCATGTGGGTGAGCAGGGCGTAGGAGGCGATGTTGAAGGGCACGCCCAGGCCCATGTCG 6128111 Query 20315 CCCGACCTCTGATACAGCTGACAGGAAAGCTCACCG------TCAGCTACATAAAATTGA 20368 | |||||| |||||||| ||||||||||||||| || | || || || || Sbjct 6128110 GCGCTCCTCTGGTACAGCTGGCAGGAAAGCTCACCGCGCGTCTCTGAGACGTAGAACTGT 6128051 Query 20369 CATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACAC 20428 | |||| || || ||||| |||||| | | |||| || ||||| || || Sbjct 6128050 GCCAGGCAGTGGCATGGAGGAAGGGCCATCTTTGGTATGTCCAGTGGATTCCATGCCGAC 6127991 Query 20429 ATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGG 20488 || ||||| | || || |||||||| || || || | | | || ||| Sbjct 6127990 ATGATGATGCGCCTGTCCGAAGGATTATTCTTGATGGTCTCGATCACCTGGCGCAGCTGG 6127931 Query 20489 TCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTC 20548 || | |||| ||| | || || | || | ||||| |||||||||| || | | Sbjct 6127930 TCGATGCCCTTGCCGTTGTAATCGTCGTCGCATTTGCCGTACTCCGCCCCAAAATGACGC 6127871 Query 20549 CACTGGAAACCGTAAACAGGTCCCAAATCCCC-----CTCCCTTC-TGTGCGCCAGGCCG 20602 |||||||| ||||| || || |||| || || | | || | ||||| ||| Sbjct 6127870 CACTGGAAGCCGTATACCGGGCCCAGGTCGCCGACGGCGCGCTCCGTGTGCCCCA----- 6127816 Query 20603 CGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGAC-TCCTGTTCTTGA 20661 || | ||||||||||||||| || || | |||||| || | || | || || || Sbjct 6127815 -GCTTGTCCAGGAACTCCCTGGTGCTGTTCTCGTCCCAGATGTGCACGTTCTTATCCTG- 6127758 Query 20662 AAGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCTTGCACTACGCCTCG 20721 ||| | ||| ||| || | || || ||||| |||||||| | | || || || Sbjct 6127757 CAGCAGCTTGGCGTCCGTCTTGCCTGCCACGAACCAGAGCAGCTCCTCGGCCACCCCGCG 6127698 Query 20722 CCAAAACACCCGCTTTGTGGTTAGTAAGGGAAAGTGGTCCCGCA 20765 | || || ||||| ||||| || | || ||| ||| |||| Sbjct 6127697 AAAGAAGACGCGCTTGGTGGTCAGCAGCGGGAAGGAGTCGCGCA 6127654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441324911051200