Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq4563 141 7e-29
seq8168 104 2e-17
seq5061 104 2e-17
seq4896 104 2e-17
seq1 86.0 5e-12
>seq4563
Length=14502029
Score = 141 bits (156), Expect = 7e-29
Identities = 209/295 (71%), Gaps = 1/295 (0%)
Strand=Plus/Minus
Query 37840 TGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAGATGCATCAGTATATGCGCA 37899
|||||||| |||| ||| | ||||| ||||||||||| || |||||| | | ||||||
Sbjct 8077024 TGTGGAACTCGGCGCAACTGCAGCTGGTGCGCGAGGGCAAAATGCATGGCTTTCTGCGCA 8076965
Query 37900 TGTATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCTCAGACCGCGCTCAACTACG 37959
|||| ||| |||||| ||| | || ||| | | || || || || | || |
Sbjct 8076964 TGTACTGGGCCAAGAAGATTCTCGAGTGGACCGCCACCCCTGAGGAGGCACTGGAATATG 8076905
Query 37960 CCATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGATCCCAACGGTTACGTCGGCT 38019
| ||| || ||||| ||||||||| | || || || |||||||| || || |||||||
Sbjct 8076904 CGATTCTCCTGAATGACAAGTACAGCCTCGATGGACGCGATCCCAATGGATATGTCGGCT 8076845
Query 38020 GTTTGTGGTCTATATGCGGGCTACACGATAGAGCCTGGCGCGAGATTCCCATTTACGGCA 38079
| ||||||| || | || | ||||| | | |||| ||| |||||| |||||
Sbjct 8076844 GCATGTGGTCCATTGGGGGAATCCACGACATGGGCTGGAAGGAGCGGGCCATTTTCGGCA 8076785
Query 38080 AGATTCGGTACATGAACTACAACGGATGTGTTAGGAAGTTTAATGTTAAC-CATT 38133
|| |||| ||||||||||| | || || | ||||| |||||||| ||||
Sbjct 8076784 AGGTTCGATACATGAACTATCAGGGGTGCAAGCGCAAGTTCGATGTTAACGCATT 8076730
>seq8168
Length=950709
Score = 104 bits (114), Expect = 2e-17
Identities = 79/91 (87%), Gaps = 2/91 (2%)
Strand=Plus/Minus
Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588
|||||||| |||||||||||||||| |||||||||||||||| | |||||||||||||
Sbjct 559103 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 559044
Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATC 115619
| |||||||||| |||||| || | ||| ||
Sbjct 559043 ATAACTGATATAATGAGCCTTTTGCGGTTTC 559013
Score = 104 bits (114), Expect = 2e-17
Identities = 79/91 (87%), Gaps = 2/91 (2%)
Strand=Plus/Minus
Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391
|||||||| |||||||||||||||| |||||||||||||||| | |||||||||||||
Sbjct 559103 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 559044
Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATC 114422
| |||||||||| |||||| || | ||| ||
Sbjct 559043 ATAACTGATATAATGAGCCTTTTGCGGTTTC 559013
Score = 104 bits (114), Expect = 2e-17
Identities = 79/91 (87%), Gaps = 2/91 (2%)
Strand=Plus/Minus
Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588
|||||||| |||||||||||||||| |||||||||||||||| | |||||||||||||
Sbjct 562201 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 562142
Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATC 115619
| |||||||||| |||||| || | ||| ||
Sbjct 562141 ATAACTGATATAATGAGCCTTTTGCGGTTTC 562111
Score = 104 bits (114), Expect = 2e-17
Identities = 79/91 (87%), Gaps = 2/91 (2%)
Strand=Plus/Minus
Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391
|||||||| |||||||||||||||| |||||||||||||||| | |||||||||||||
Sbjct 562201 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 562142
Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATC 114422
| |||||||||| |||||| || | ||| ||
Sbjct 562141 ATAACTGATATAATGAGCCTTTTGCGGTTTC 562111
>seq5061
Length=120080
Score = 104 bits (114), Expect = 2e-17
Identities = 79/91 (87%), Gaps = 2/91 (2%)
Strand=Plus/Plus
Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391
|||||||| |||||||||||||||| |||||||||||||||| | |||||||||||||
Sbjct 67449 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 67508
Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATC 114422
| |||||||||| |||||| || | ||| ||
Sbjct 67509 ATAACTGATATAATGAGCCTTTTGCGGTTTC 67539
Score = 104 bits (114), Expect = 2e-17
Identities = 79/91 (87%), Gaps = 2/91 (2%)
Strand=Plus/Plus
Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588
|||||||| |||||||||||||||| |||||||||||||||| | |||||||||||||
Sbjct 67449 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 67508
Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATC 115619
| |||||||||| |||||| || | ||| ||
Sbjct 67509 ATAACTGATATAATGAGCCTTTTGCGGTTTC 67539
Score = 91.5 bits (100), Expect = 1e-13
Identities = 80/96 (83%), Gaps = 3/96 (3%)
Strand=Plus/Plus
Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391
|||||||| |||||||||||||||| ||||||||||||| || | ||||||||||||
Sbjct 57136 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAATTGTTAACGATCTAAGGAACA 57195
Query 114392 AAAACTGATATATTGAGCCATTCGTGGTAT-CGTCT 114426
| |||||||||| ||| || || | ||| | |||||
Sbjct 57196 ATAACTGATATAATGATCCTTTTGCGGTTTCCGTCT 57231
Score = 91.5 bits (100), Expect = 1e-13
Identities = 80/96 (83%), Gaps = 3/96 (3%)
Strand=Plus/Plus
Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588
|||||||| |||||||||||||||| ||||||||||||| || | ||||||||||||
Sbjct 57136 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAATTGTTAACGATCTAAGGAACA 57195
Query 115589 AAAACTGATATATTGAGCCATTCGTGGTAT-CGTCT 115623
| |||||||||| ||| || || | ||| | |||||
Sbjct 57196 ATAACTGATATAATGATCCTTTTGCGGTTTCCGTCT 57231
>seq4896
Length=24350
Score = 104 bits (114), Expect = 2e-17
Identities = 79/91 (87%), Gaps = 2/91 (2%)
Strand=Plus/Plus
Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391
|||||||| |||||||||||||||| |||||||||||||||| | |||||||||||||
Sbjct 6952 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 7011
Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATC 114422
| |||||||||| |||||| || | ||| ||
Sbjct 7012 ATAACTGATATAATGAGCCTTTTGCGGTTTC 7042
Score = 104 bits (114), Expect = 2e-17
Identities = 79/91 (87%), Gaps = 2/91 (2%)
Strand=Plus/Plus
Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588
|||||||| |||||||||||||||| |||||||||||||||| | |||||||||||||
Sbjct 6952 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 7011
Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATC 115619
| |||||||||| |||||| || | ||| ||
Sbjct 7012 ATAACTGATATAATGAGCCTTTTGCGGTTTC 7042
>seq1
Length=22559587
Score = 86.0 bits (94), Expect = 5e-12
Identities = 89/117 (76%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 33897 GAAACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATC 33956
|| ||| || | ||| || |||||||| || || || ||||||||| |||||||| ||
Sbjct 1136941 GATACCACCGCGCAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTC 1137000
Query 33957 TGCCAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013
| || ||| |||| |||| ||||||||||| || ||||| |||||||||||
Sbjct 1137001 GGACAGGGTTCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATC 1137057
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397020395761360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |